RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 FIBINQ8TAL6 211 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 SLC35G2Q8TBE7 412 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 ZC3H10Q96K80 434 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 C16orf45Q96MC5 204 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 OR14A2Q96R54 314 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 PRMT1Q99873 361 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 ZYG11BQ9C0D3 744 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 RETREG1Q9H6L5 497 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 OR12D3Q9UGF7 316 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 PCSK1NQ9UHG2 260 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 GGA2Q9UJY4 613 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 FZD10Q9ULW2 581 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 SLC27A6Q9Y2P4 619 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 CFAP20Q9Y6A4 193 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 COL4A2P08572 1712 aa8.17□□□□□ -1.1
TRAPPC12-221ENST00000489032 MATN2O00339 956 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 NPC1O15118 1278 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 LRCH4O75427 683 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 PROSCO94903 275 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 ATP5BP06576 529 aaKnown RBP8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 RHOCP08134 193 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 CCDC175P0C221 793 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 CISD3P0C7P0 127 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 POLR2EP19388 210 aaKnown RBP8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 MAN1A1P33908 653 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 GZMKP49863 264 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 SGSHP51688 502 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 VAV2P52735 878 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 TPI1P60174 286 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 KIF5AQ12840 1032 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 MESDQ14696 234 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 GRM7Q14831 915 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 PGS1Q32NB8 556 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 CCDC157Q569K6 752 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 EOGTQ5NDL2 527 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 THEMIS2Q5TEJ8 643 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 FAM111BQ6SJ93 734 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 RAD9BQ6WBX8 426 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 Q6ZVL8 140 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 C14orf80Q86SX3 495 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 TTC7BQ86TV6 843 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 CIR1Q86X95 450 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 TMEM139Q8IV31 216 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 CCDC185Q8N715 623 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 DEFB124Q8NES8 71 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 KIF18AQ8NI77 898 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 MDM1Q8TC05 714 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 IGSF8Q969P0 613 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 TBC1D31Q96DN5 1066 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 LRIG1Q96JA1 1093 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 PRICKLE1Q96MT3 831 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 GNRHR2Q96P88 292 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 TRIM7Q9C029 511 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 CIPCQ9C0C6 399 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 SLC32A1Q9H598 525 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 DHX35Q9H5Z1 703 aaKnown RBP8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 CATSPERBQ9H7T0 1116 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 FBRSL1Q9HCM7 1045 aaKnown RBP8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 TMEM9BQ9NQ34 198 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 ABCB8Q9NUT2 735 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 ELOVL2Q9NXB9 296 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 TRMT1Q9NXH9 659 aaKnown RBP8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 TRPS1Q9UHF7 1281 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 PLA2G4CQ9UP65 541 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 PPP2R2CQ9Y2T4 447 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 SNX10Q9Y5X0 201 aa8.16□□□□□ -1.1
TRAPPC12-221ENST00000489032 MYOFQ9NZM1 2061 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 IGLV3-10A0A075B6K4 115 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 LNP1A1A4G5 178 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 DRGXA6NNA5 263 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 K7EQS6 105 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 EEF2KO00418 725 aaKnown RBP8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 SPOPO43791 374 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 CREB3O43889 395 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 MTA2O94776 668 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 TRIM16O95361 564 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 KRT7P08729 469 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 INHBBP09529 407 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 EPHB2P29323 1055 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 HLA-FP30511 346 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 OR1E1P30953 314 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 NNMTP40261 264 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 SLC1A1P43005 524 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 ST8SIA6P61647 398 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 CREB5Q02930 508 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 SULT2A1Q06520 285 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 LMAN2Q12907 356 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 IL10RAQ13651 578 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 KRT81Q14533 505 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 ELF2Q15723 593 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 C3orf36Q3SXR2 165 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 C5orf22Q49AR2 442 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 RAB6CQ53S08 254 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 PPP6R3Q5H9R7 873 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 NAIF1Q69YI7 327 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 ZNF783Q6ZMS7 281 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 Q6ZS52 159 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 ADGRE4PQ86SQ3 457 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 SETD3Q86TU7 594 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 MAP7D3Q8IWC1 876 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms