RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 WBP1Q96G27 269 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 MRFAP1L1Q96HT8 127 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 PLEKHG4BQ96PX9 1271 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 FAM118BQ9BPY3 351 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 TBC1D10AQ9BXI6 508 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 B3GNT4Q9C0J1 378 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 TRABDQ9H4I3 376 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 STN1Q9H668 368 aaKnown RBP11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 UGT1A7Q9HAW7 530 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 UGT1A10Q9HAW8 530 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 UGT1A8Q9HAW9 530 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 SLC39A1Q9NY26 324 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 PDP2Q9P2J9 529 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 TRHDEQ9UKU6 1024 aa11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 REXO2Q9Y3B8 237 aaKnown RBP11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 FASNP49327 2511 aaKnown RBP11.77□□□□□ -0.53
CCHCR1-215ENST00000488920 OR5K4A6NMS3 321 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 PDZK1P1A8MUH7 402 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 APOC4-APOC2K7ER74 178 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 IPO7O95373 1038 aaKnown RBP11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 APOC2P02655 101 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 WT1P19544 449 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 RPL10P27635 214 aaKnown RBP11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 CD82P27701 267 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 CA5AP35218 305 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 CTNNA1P35221 906 aaKnown RBP11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 ARSDP51689 593 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 COPS2P61201 443 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 UBE2IP63279 158 aaKnown RBP11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 TMEM115Q12893 351 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 MPP3Q13368 585 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 XRCC4Q13426 336 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 PTPRCAPQ14761 206 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 AADACL2Q6P093 401 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 FAM151BQ6UXP7 276 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 DTX1Q86Y01 620 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 ACRBPQ8NEB7 543 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 CCDC112Q8NEF3 446 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 ACTL9Q8TC94 416 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 VPS35Q96QK1 796 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 FICDQ9BVA6 458 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 OSBPL8Q9BZF1 889 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 SEMA4CQ9C0C4 833 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 LACRTQ9GZZ8 138 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 IL17CQ9P0M4 197 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 ZNF624Q9P2J8 865 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 TRIM10Q9UDY6 481 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 KLHL3Q9UH77 587 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 PCDHGA3Q9Y5H0 932 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 B3GALT1Q9Y5Z6 326 aa11.76□□□□□ -0.53
CCHCR1-215ENST00000488920 MACROD2A1Z1Q3 448 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 B4E171 279 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 STMND1H3BQB6 276 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 GPR39O43194 453 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 VIPP01282 170 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 TYRP1P17643 537 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 XRCC1P18887 633 aaPredicted RBP11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 HLA-DPA1P20036 260 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 FECHP22830 423 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 SPAM1P38567 509 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 SLC19A1P41440 591 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 TSPAN7P41732 249 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 EPHA4P54764 986 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 DRG2P55039 364 aaKnown RBP11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 RWDD2BP57060 319 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 EIF3EP60228 445 aaKnown RBP11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 OTUD4Q01804 1114 aaKnown RBP11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 GTF2H3Q13889 308 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 DCAF12Q5T6F0 453 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 ZDHHC20Q5W0Z9 365 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 ANKS6Q68DC2 871 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 DARS2Q6PI48 645 aaKnown RBP11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 GLT6D1Q7Z4J2 308 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 ARHGAP22Q7Z5H3 698 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 GAS2L3Q86XJ1 694 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 TRAPPC5Q8IUR0 188 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 TRIM48Q8IWZ4 208 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 RASGEF1AQ8N9B8 481 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 SGF29Q96ES7 293 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 TTC25Q96NG3 672 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 CTRCQ99895 268 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 APOL2Q9BQE5 337 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 GORASP1Q9BQQ3 440 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 TIMM29Q9BSF4 260 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 DDA1Q9BW61 102 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 FSD1LQ9BXM9 530 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 GBA3Q9H227 469 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 HACD3Q9P035 362 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 PKP3Q9Y446 797 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 SLC30A1Q9Y6M5 507 aa11.75□□□□□ -0.53
CCHCR1-215ENST00000488920 GLYATL1P3A0A0U1RQE8 302 aa11.74□□□□□ -0.53
CCHCR1-215ENST00000488920 CCDC66A2RUB6 948 aa11.74□□□□□ -0.53
CCHCR1-215ENST00000488920 GRID2IPA4D2P6 1211 aa11.74□□□□□ -0.53
CCHCR1-215ENST00000488920 PRR19A6NJB7 356 aa11.74□□□□□ -0.53
CCHCR1-215ENST00000488920 OR52A4PA6NMU1 304 aa11.74□□□□□ -0.53
CCHCR1-215ENST00000488920 BTNL10A8MVZ5 291 aa11.74□□□□□ -0.53
CCHCR1-215ENST00000488920 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.74□□□□□ -0.53
CCHCR1-215ENST00000488920 KCNN4O15554 427 aa11.74□□□□□ -0.53
CCHCR1-215ENST00000488920 PJA2O43164 708 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms