RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 C1QTNF1Q9BXJ1 281 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 C1QTNF4Q9BXJ3 329 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 SPRY4Q9C004 299 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 UBA2Q9UBT2 640 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 FBXL17Q9UF56 701 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 FBXL2Q9UKC9 423 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 NENFQ9UMX5 172 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 AMDHD2Q9Y303 409 aa3.81□□□□□ -1.8
ECHDC1-217ENST00000488087 PRXQ9BXM0 1461 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 BRD4O60885 1362 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 EIF3AQ14152 1382 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 DHX29Q7Z478 1369 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 PASKQ96RG2 1323 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 ZNF644Q9H582 1327 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 MAPK8IP3Q9UPT6 1336 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 DENND3A2RUS2 1198 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 MAGEA13PA6NCF6 341 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 AHCYL1O43865 530 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 TPPPO94811 219 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 STARD3NLO95772 234 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 CORO1AP31146 461 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 COPB2P35606 906 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 RAD52P43351 418 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 FASLGP48023 281 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 SREBF2Q12772 1141 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 DECR1Q16698 335 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 MYLK3Q32MK0 819 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 ALDH1L2Q3SY69 923 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 RAB41Q5JT25 222 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 IRAK1BP1Q5VVH5 260 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 PMS2CLQ68D20 193 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 BHLHA9Q7RTU4 235 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 RBM23Q86U06 439 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 CCDC190Q86UF4 302 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 RNF113BQ8IZP6 322 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 CNPY4Q8N129 248 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 SPATA22Q8NHS9 363 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 LMO3Q8TAP4 145 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 DNAAF4Q8WXU2 420 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 FIG4Q92562 907 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 TAAR8Q969N4 342 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 RHBDF1Q96CC6 855 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 SAT2Q96F10 170 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 EGLN2Q96KS0 407 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 OR2A14Q96R47 310 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 SMC6Q96SB8 1091 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 SRSF8Q9BRL6 282 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 TEX12Q9BXU0 123 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 SLCO5A1Q9H2Y9 848 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 GAREM1Q9H706 876 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 EPB41L5Q9HCM4 733 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 MTMR10Q9NXD2 777 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 NKIRAS2Q9NYR9 191 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 SUCLA2Q9P2R7 463 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 PADI1Q9ULC6 663 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 CMAHPQ9Y471 501 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 TIAM1Q13009 1591 aa3.8□□□□□ -1.8
ECHDC1-217ENST00000488087 RAPGEF2Q9Y4G8 1499 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 TAF1P21675 1872 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 HFM1A2PYH4 1435 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 NPC1L1Q9UHC9 1359 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 PDS5AQ29RF7 1337 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 WIZO95785 1651 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 IKBKBO14920 756 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 KCNN4O15554 427 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 PPP1R3DO95685 299 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 HSPA5P11021 654 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 S1PR1P21453 382 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 SAT1P21673 171 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 PON1P27169 355 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 GCH1P30793 250 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 CCKBRP32239 447 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 ACTN2P35609 894 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 IL15P40933 162 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 APOBEC1P41238 236 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 MSH2P43246 934 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 AMPHP49418 695 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 MRPL12P52815 198 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 MFAP4P55083 255 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 EEF1A2Q05639 463 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 STK4Q13043 487 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 COASYQ13057 564 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 MFSD4BQ5TF39 518 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 TMEM198Q66K66 360 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 C18orf63Q68DL7 685 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 BRAT1Q6PJG6 821 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 UNQ6126/PRO20091Q6UXV3 157 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 CFAP77Q6ZQR2 320 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 ENOSF1Q7L5Y1 443 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 EPHX4Q8IUS5 362 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 TTC30BQ8N4P2 665 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 ACVR1CQ8NER5 493 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 SLC20A1Q8WUM9 679 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 SLC38A5Q8WUX1 472 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 ANKRD7Q92527 254 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 ABTB1Q969K4 478 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 PCYT2Q99447 389 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 SEMA3CQ99985 751 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms