RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 CCNI2Q6ZMN8 369 aaPredicted RBP2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 CREB3L2Q70SY1 520 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 HIST3H2AQ7L7L0 130 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 TMEM219Q86XT9 240 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 BBS10Q8TAM1 723 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 SLC38A5Q8WUX1 472 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 ABTB1Q969K4 478 aaPredicted RBP2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 LRRC59Q96AG4 307 aaKnown RBP2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 MTBPQ96DY7 904 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 TMEM19Q96HH6 336 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 ADGRG7Q96K78 797 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 CEP295NLQ96MC4 621 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 DDOQ99489 341 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 PPIL3Q9H2H8 161 aaKnown RBP2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 MAGIXQ9H6Y5 334 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 MCM9Q9NXL9 1143 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 ZNF224Q9NZL3 707 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 KLHL9Q9P2J3 617 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 WNT16Q9UBV4 365 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 MALT1Q9UDY8 824 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 CHORDC1Q9UHD1 332 aaPredicted RBP2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 NRBP1Q9UHY1 535 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 SIX4Q9UIU6 781 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 FBXL2Q9UKC9 423 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 ICAM5Q9UMF0 924 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 TMEM5Q9Y2B1 443 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 OR2W1Q9Y3N9 320 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 NFS1Q9Y697 457 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 DOCK7Q96N67 2140 aa2.81□□□□□ -1.96
R3HDM1-219ENST00000488035 PTPRCP08575 1304 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 LOC102723996A0A087X1L8 192 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 A0A0G2JPF8 293 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 TMEM8BA6NDV4 472 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 HNRNPCL3B7ZW38 293 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 TMEM189-UBE2V1I3L0A0 370 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 J3QR06 171 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 SH2B2O14492 632 aaPredicted RBP2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 P4HA2O15460 535 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 KCNN4O15554 427 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 TMCC2O75069 709 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 LDB3O75112 727 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 GPC4O75487 556 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 RSL1D1O76021 490 aaKnown RBP2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 HNRNPCL4P0DMR1 293 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 NR2F1P10589 423 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 ACTN1P12814 892 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 PRLRP16471 622 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 RRM1P23921 792 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 NMBRP28336 390 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 NNMTP40261 264 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 TMPOP42166 694 aaKnown RBP2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 FASLGP48023 281 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 PNLIPRP2P54317 469 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 SEC61A1P61619 476 aaKnown RBP2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 TMF1P82094 1093 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 RELQ04864 619 aaPredicted RBP2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 CXCL9Q07325 125 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 LRMPQ12912 555 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 UBE2V1Q13404 147 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 KCNC3Q14003 757 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 SYT16Q17RD7 645 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 KRT71Q3SY84 523 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 RAB6CQ53S08 254 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 BMP2KLQ5H9B9 411 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 STXBP5Q5T5C0 1151 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 C9orf57Q5W0N0 161 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 DENND5BQ6ZUT9 1274 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 C16orf82Q7Z2V1 217 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 GALNT13Q8IUC8 556 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 HACE1Q8IYU2 909 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 OR8H2Q8N162 312 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 LSMEM1Q8N8F7 131 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 CCDC89Q8N998 374 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 SLC38A9Q8NBW4 561 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 C1orf131Q8NDD1 294 aaKnown RBP2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 GSDMBQ8TAX9 411 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 FEM1CQ96JP0 617 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 OR1F2PQ96R84 312 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 SERINC2Q96SA4 455 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 HGH1Q9BTY7 390 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 KLHL4Q9C0H6 718 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 RAB6CQ9H0N0 254 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 PCDH9Q9HC56 1237 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 CD93Q9NPY3 652 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 MBNL1Q9NR56 388 aaKnown RBP2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 TMEM30AQ9NV96 361 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 SMARCAL1Q9NZC9 954 aa2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 EXO1Q9UQ84 846 aaKnown RBP2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 MAGED1Q9Y5V3 778 aaPredicted RBP2.8□□□□□ -1.96
R3HDM1-219ENST00000488035 GOLGA6L9A6NEM1 432 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 C5orf60A6NFR6 353 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 HNRNPCL2B2RXH8 293 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 TMEM178BH3BS89 294 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 PLK4O00444 970 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 HS3ST1O14792 307 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 CREG1O75629 220 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 ZWINTO95229 277 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 BCL10O95999 233 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 IL11P20809 199 aa2.79□□□□□ -1.96
R3HDM1-219ENST00000488035 CD81P60033 236 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms