RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ASB3Q9Y575 518 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 USP3Q9Y6I4 520 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 LCHNA4D1U4 455 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 HPCAL1P37235 193 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 MCCD1P59942 119 aaPredicted RBP11.7□□□□□ -0.54
TRA2B-214ENST00000487615 CYP4F8P98187 520 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 PAGE2BQ5JRK9 111 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 KIAA0319Q5VV43 1072 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 TXNDC8Q6A555 127 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 OTOP2Q7RTS6 562 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 TCAIMQ8N3R3 496 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 OR2T12Q8NG77 320 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 SUSD6Q92537 303 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 MPP4Q96JB8 637 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 ALG2Q9H553 416 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 LZTS1Q9Y250 596 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 TP73O15350 636 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 POP4O95707 220 aaKnown RBP11.7□□□□□ -0.54
TRA2B-214ENST00000487615 MAGEA3P43357 314 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 USP46P62068 366 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 LIPEQ05469 1076 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 ABRQ12979 859 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 XKR6Q5GH73 641 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 PLPP4Q5VZY2 271 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 RPS27LQ71UM5 84 aaKnown RBP11.7□□□□□ -0.54
TRA2B-214ENST00000487615 SNX20Q7Z614 316 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 CLVS1Q8IUQ0 354 aaPredicted RBP11.7□□□□□ -0.54
TRA2B-214ENST00000487615 NAT16Q8N8M0 369 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 SPPL2AQ8TCT8 520 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 KIAA1191Q96A73 305 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 ASB9Q96DX5 294 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 OTUB1Q96FW1 271 aaPredicted RBP11.7□□□□□ -0.54
TRA2B-214ENST00000487615 PPP1R16AQ96I34 528 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 MAPRE3Q9UPY8 281 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 CCL16O15467 120 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 ZNF37AP17032 561 aaPredicted RBP11.7□□□□□ -0.54
TRA2B-214ENST00000487615 GPC1P35052 558 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 NSG1P42857 185 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 TTC23Q5W5X9 447 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 SULT1C3Q6IMI6 304 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 LYSMD3Q7Z3D4 306 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 OVCA2Q8WZ82 227 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 GJD2Q9UKL4 321 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 KCNE2Q9Y6J6 123 aa11.7□□□□□ -0.54
TRA2B-214ENST00000487615 STX16-NPEPL1H3BU86 382 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 ZSCAN9O15535 394 aaPredicted RBP11.69□□□□□ -0.54
TRA2B-214ENST00000487615 FGF19O95750 216 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 ELFN1P0C7U0 828 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 RNF220Q5VTB9 566 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 GLYATQ6IB77 296 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 ADCK1Q86TW2 530 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 PLD3Q8IV08 490 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 SPATA17Q96L03 361 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 TSSK3Q96PN8 268 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 DERL2Q9GZP9 239 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 PCDHAC1Q9H158 963 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 KCNK13Q9HB14 408 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 GIMAP4Q9NUV9 329 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 CDC7O00311 574 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 GJB5O95377 273 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 CLDN9O95484 217 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 FYNP06241 537 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 CLK1P49759 484 aaKnown RBP11.69□□□□□ -0.54
TRA2B-214ENST00000487615 ERVK-8P63133 956 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 NEDD8Q15843 81 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 PITRM1Q5JRX3 1037 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 CLLU1OSQ5K130 101 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 CYP4V2Q6ZWL3 525 aaPredicted RBP11.69□□□□□ -0.54
TRA2B-214ENST00000487615 ARHGAP12Q8IWW6 846 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 RNF168Q8IYW5 571 aaPredicted RBP11.69□□□□□ -0.54
TRA2B-214ENST00000487615 CLP1Q92989 425 aaKnown RBP11.69□□□□□ -0.54
TRA2B-214ENST00000487615 MOCOSQ96EN8 888 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 POPDC3Q9HBV1 291 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 DDX18Q9NVP1 670 aaKnown RBP11.69□□□□□ -0.54
TRA2B-214ENST00000487615 ADPRHL2Q9NX46 363 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 TBC1D3BA6NDS4 549 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.69□□□□□ -0.54
TRA2B-214ENST00000487615 COCHO43405 550 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 GPIP06744 558 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 ALPIP09923 528 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 GRK3P35626 688 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 GPR1P46091 355 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 MTTPP55157 894 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 GPR33Q49SQ1 333 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 RTP2Q5QGT7 225 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 ZNF678Q5SXM1 525 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 RAET1GQ6H3X3 334 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 SPESP1Q6UW49 350 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 ABRAXAS1Q6UWZ7 409 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 TTC9BQ8N6N2 239 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 FAM47BQ8NA70 645 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 MZB1Q8WU39 189 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 AUTS2Q8WXX7 1259 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 FAM83DQ9H4H8 585 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 RETREG1Q9H6L5 497 aa11.69□□□□□ -0.54
TRA2B-214ENST00000487615 NLE1Q9NVX2 485 aaPredicted RBP11.69□□□□□ -0.54
TRA2B-214ENST00000487615 TDRKHQ9Y2W6 561 aaKnown RBP11.69□□□□□ -0.54
TRA2B-214ENST00000487615 G3V2L1 256 aa11.68□□□□□ -0.54
TRA2B-214ENST00000487615 RFXANKO14593 260 aa11.68□□□□□ -0.54
TRA2B-214ENST00000487615 FFAR2O15552 330 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms