RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TAAR2Q9P1P5 351 aa7.09□□□□□ -1.27
UBE4B-209ENST00000487244 ATXN10Q9UBB4 475 aa7.09□□□□□ -1.27
UBE4B-209ENST00000487244 NFKBIL1Q9UBC1 381 aaPredicted RBP7.09□□□□□ -1.27
UBE4B-209ENST00000487244 PADI4Q9UM07 663 aa7.09□□□□□ -1.27
UBE4B-209ENST00000487244 ARL5AQ9Y689 179 aa7.09□□□□□ -1.27
UBE4B-209ENST00000487244 URB1O60287 2271 aaKnown RBP7.09□□□□□ -1.27
UBE4B-209ENST00000487244 A0A1W2PNU3 283 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 RGSL1A5PLK6 1076 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 TRABD2BA6NFA1 517 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 USP27XA6NNY8 438 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 TAF4O00268 1085 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 UGT1A9O60656 530 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 CSO75390 466 aaKnown RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 SLC25A14O95258 325 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ASMTLO95671 621 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ECEL1O95672 775 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 MT-CO3P00414 261 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 FGGP02679 453 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ZSCAN5DPP0CG00 497 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ACP5P13686 325 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 JUPP14923 745 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF8P17098 575 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 TPH1P17752 444 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 UGT1A6P19224 532 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 UGT1A1P22309 533 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 UGT1A4P22310 534 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 LORP23490 312 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 UGT1A3P35503 534 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 UGT1A5P35504 534 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 HMGCLP35914 325 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ACTR1BP42025 376 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 DUSP3P51452 185 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 PDX1P52945 283 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ACTR1AP61163 376 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 CCL7P80098 99 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ILF3Q12906 894 aaKnown RBP eCLIP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 HLTFQ14527 1009 aaKnown RBP eCLIP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 CHRNA6Q15825 494 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 PLA2G4EQ3MJ16 856 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ATP13A5Q4VNC0 1218 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 C14orf28Q4W4Y0 310 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ARSJQ5FYB0 599 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 CERCAMQ5T4B2 595 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 OGFOD3Q6PK18 319 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 CRTC3Q6UUV7 619 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 CHST15Q7LFX5 561 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 B3GNT8Q7Z7M8 397 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ADGRG6Q86SQ4 1221 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 GALNT13Q8IUC8 556 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF547Q8IVP9 402 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 REXO1L1PQ8IX06 675 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 RAVER1Q8IY67 606 aaKnown RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 NAGSQ8N159 534 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 SDR16C5Q8N3Y7 309 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 TRAM1L1Q8N609 369 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 Q8N9G6 341 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 TRIM58Q8NG06 486 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ZDHHC1Q8WTX9 485 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 SCG3Q8WXD2 468 aaKnown RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 NAT6Q93015 286 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 GLYATL1Q969I3 302 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 RTP4Q96DX8 246 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 PLEKHG4BQ96PX9 1271 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ZSCAN5AQ9BUG6 496 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 GSDMCQ9BYG8 508 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 CDH19Q9H159 772 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 UGT1A7Q9HAW7 530 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 UGT1A10Q9HAW8 530 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 UGT1A8Q9HAW9 530 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 TRNAU1APQ9NX07 287 aaKnown RBP7.08□□□□□ -1.28
UBE4B-209ENST00000487244 SMARCAL1Q9NZC9 954 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 NCKIPSDQ9NZQ3 722 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 VPS18Q9P253 973 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ZNHIT2Q9UHR6 403 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 ZMIZ1Q9ULJ6 1067 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 CLCA2Q9UQC9 943 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 KCNK6Q9Y257 313 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 RNF215Q9Y6U7 377 aa7.08□□□□□ -1.28
UBE4B-209ENST00000487244 AHCTF1Q8WYP5 2266 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 TRBV23OR9-2A0A075B6M9 112 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 A0A1W2PQM1 296 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 CCDC78A2IDD5 438 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 NUAK1O60285 661 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 CEP104O60308 925 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 IFNB1P01574 187 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 RPLP0P05388 317 aaKnown RBP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 PYGLP06737 847 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 CDK4P11802 303 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 SPAM1P38567 509 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 TNNT3P45378 269 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 ZNF140P52738 457 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 TMPRSS15P98073 1019 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 E2F1Q01094 437 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 SRSF11Q05519 484 aaKnown RBP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 CYP4F3Q08477 520 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 PRPSAP1Q14558 356 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 TAF1AQ15573 450 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-209ENST00000487244 PARP6Q2NL67 630 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 TBCELQ5QJ74 424 aa7.07□□□□□ -1.28
UBE4B-209ENST00000487244 TMPRSS9Q7Z410 1059 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms