RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 EBNA1BP2Q99848 306 aaKnown RBP12.97□□□□□ -0.33
NR1H3-223ENST00000486991 TCEAL2Q9H3H9 227 aaPredicted RBP12.97□□□□□ -0.33
NR1H3-223ENST00000486991 BPIFA1Q9NP55 256 aa12.97□□□□□ -0.33
NR1H3-223ENST00000486991 NLGN3Q9NZ94 848 aa12.97□□□□□ -0.33
NR1H3-223ENST00000486991 NCKIPSDQ9NZQ3 722 aa12.97□□□□□ -0.33
NR1H3-223ENST00000486991 SOX13Q9UN79 622 aa12.97□□□□□ -0.33
NR1H3-223ENST00000486991 TEX264Q9Y6I9 313 aa12.97□□□□□ -0.33
NR1H3-223ENST00000486991 FLNBO75369 2602 aaKnown RBP12.97□□□□□ -0.33
NR1H3-223ENST00000486991 ZNF462Q96JM2 2506 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 A0A1W2PNU3 283 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 MAGEB16A2A368 324 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 PMS2P1A4D2B8 440 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 K7ESM1 405 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 SCAMP1O15126 338 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 LDB2O43679 373 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 LZTS3O60299 673 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 CSO75390 466 aaKnown RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 CSF2P04141 144 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 PLA2G2AP14555 144 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 PGAM1P18669 254 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 HTR1BP28222 390 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 NMBRP28336 390 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 MAGEA4P43358 317 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 BLKP51451 505 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 STC1P52823 247 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 GABREP78334 506 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 PDE1BQ01064 536 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 PTSQ03393 145 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 TSTD2Q5T7W7 516 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 ARHGAP40Q5TG30 622 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 NLRP9Q7RTR0 991 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 HSD11B1LQ7Z5J1 315 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 TMC3Q7Z5M5 1100 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 RBFAQ8N0V3 343 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 CACTIN-AS1Q8N1I8 211 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 CBARPQ8N350 705 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 PLA2G15Q8NCC3 412 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 OR4K2Q8NGD2 314 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 OR13C4Q8NGS5 318 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 ZNF669Q96BR6 464 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 DNAJC1Q96KC8 554 aaKnown RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 C9orf72Q96LT7 481 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 ZNF778Q96MU6 729 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 WDR83Q9BRX9 315 aaKnown RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 TRIM56Q9BRZ2 755 aaKnown RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 KIFC1Q9BW19 673 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 PHACTR1Q9C0D0 580 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 MRM3Q9HC36 420 aaKnown RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 PKD2L2Q9NZM6 624 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 SPASTQ9UBP0 616 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 SLC2A6Q9UGQ3 507 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 ZC3H7BQ9UGR2 993 aaKnown RBP12.96□□□□□ -0.33
NR1H3-223ENST00000486991 RAB21Q9UL25 225 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 PKP3Q9Y446 797 aa12.96□□□□□ -0.33
NR1H3-223ENST00000486991 FAM237BA0A1B0GVD1 139 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 MROH6A6NGR9 719 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 PYCARD-AS1I3L0S3 204 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 TK2O00142 265 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 PSMD11O00231 422 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 CCL22O00626 93 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 TPP1O14773 563 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 POLBP06746 335 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 JUNDP17535 347 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 HMGCLP35914 325 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 ETV3P41162 512 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 ZNF140P52738 457 aaPredicted RBP12.95□□□□□ -0.34
NR1H3-223ENST00000486991 SLMAPQ14BN4 828 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 LRRC14Q15048 493 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 SKIDA1Q1XH10 827 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 ANKRD20A4Q4UJ75 823 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 ESRP1Q6NXG1 681 aaKnown RBP12.95□□□□□ -0.34
NR1H3-223ENST00000486991 MACC1Q6ZN28 852 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 CAPN12Q6ZSI9 719 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 RFLNAQ6ZTI6 216 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 Q6ZVL8 140 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 CCNJLQ8IV13 435 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 PALM2Q8IXS6 379 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 FAM181AQ8N9Y4 354 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 IFI44Q8TCB0 444 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 STYXQ8WUJ0 223 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.95□□□□□ -0.346e-13■■■■■ 112.3
NR1H3-223ENST00000486991 GLMNQ92990 594 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 EID2BQ96D98 161 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 HIC2Q96JB3 615 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 TBATAQ96M53 351 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 COQ10AQ96MF6 247 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 NAT9Q9BTE0 207 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 SEMA4CQ9C0C4 833 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 NLE1Q9NVX2 485 aaPredicted RBP12.95□□□□□ -0.34
NR1H3-223ENST00000486991 KCTD5Q9NXV2 234 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 IL17CQ9P0M4 197 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 CD84Q9UIB8 345 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 RPS6KL1Q9Y6S9 549 aa12.95□□□□□ -0.34
NR1H3-223ENST00000486991 CPED1A4D0V7 1026 aa12.94□□□□□ -0.34
NR1H3-223ENST00000486991 RECQL5O94762 991 aaPredicted RBP12.94□□□□□ -0.34
NR1H3-223ENST00000486991 BPIP17213 487 aa12.94□□□□□ -0.34
NR1H3-223ENST00000486991 HADHAP40939 763 aa12.94□□□□□ -0.34
NR1H3-223ENST00000486991 SPINT3P49223 89 aa12.94□□□□□ -0.34
NR1H3-223ENST00000486991 RPIAP49247 311 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms