RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 GPT2Q8TD30 523 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 SUSD6Q92537 303 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 NT5C3BQ969T7 300 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 ISG20Q96AZ6 181 aaKnown RBP5.5□□□□□ -1.53
SF1-217ENST00000486960 HDAC11Q96DB2 347 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 FBXL20Q96IG2 436 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CLPTM1LQ96KA5 538 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 NSMCE2Q96MF7 247 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 ANKRD27Q96NW4 1050 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 FCRL4Q96PJ5 515 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 INTS14Q96SY0 518 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 PIP5K1AQ99755 562 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 C19orf43Q9BQ61 176 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 IRX2Q9BZI1 471 aaPredicted RBP5.5□□□□□ -1.53
SF1-217ENST00000486960 SHCBP1LQ9BZQ2 653 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 WNT10AQ9GZT5 417 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CHST8Q9H2A9 424 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 ADAM7Q9H2U9 754 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 RHBGQ9H310 441 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 MFSD1Q9H3U5 465 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 HEYLQ9NQ87 328 aaPredicted RBP5.5□□□□□ -1.53
SF1-217ENST00000486960 FBXO28Q9NVF7 368 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 BARHL2Q9NY43 387 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 KCND2Q9NZV8 630 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 VPS54Q9P1Q0 977 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 ARHGAP20Q9P2F6 1191 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 TJP2Q9UDY2 1190 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 HMGXB4Q9UGU5 601 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CDH22Q9UJ99 828 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 KCND3Q9UK17 655 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 SORCS3Q9UPU3 1222 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 CFL2Q9Y281 166 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 PLEKHM1Q9Y4G2 1056 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 PCDHA1Q9Y5I3 950 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 URB1O60287 2271 aaKnown RBP5.5□□□□□ -1.53
SF1-217ENST00000486960 PLXNB3Q9ULL4 1909 aa5.5□□□□□ -1.53
SF1-217ENST00000486960 MYH2Q9UKX2 1941 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 A0A087WZY1 265 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 A0A1B0GTL3 188 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 WDR91A4D1P6 747 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 OR6C75A6NL08 312 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 EFCAB8A8MWE9 144 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 BTBD18B2RXH4 712 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 F8WDY8 70 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 MYO1CO00159 1063 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 BTN3A1O00481 513 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 RRP8O43159 456 aaKnown RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 SSX5O60225 188 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 BUB1BO60566 1050 aaPredicted RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 KRT36O76013 467 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 CIAO1O76071 339 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 GJB5O95377 273 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 VNN2O95498 520 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 CH25HO95992 272 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 HLA-DRAP01903 254 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 YES1P07947 543 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 MYZAPP0CAP1 466 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 GSPT1P15170 499 aaKnown RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 SMPD1P17405 629 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 DDX5P17844 614 aaKnown RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 ADORA2AP29274 412 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 PTPN6P29350 595 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 SERPINA4P29622 427 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 HOXA7P31268 230 aaPredicted RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 MC5RP33032 325 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 TRHRP34981 398 aaPredicted RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 CETN2P41208 172 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 CDKN1BP46527 198 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 FNTAP49354 379 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 GDI2P50395 445 aaKnown RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 RAB28P51157 221 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 GALK1P51570 392 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 NOMO3P69849 1222 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 SOX4Q06945 474 aaPredicted RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 FOXC1Q12948 553 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 GPNMBQ14956 572 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 SGCBQ16585 318 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 TAZQ16635 292 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 UGP2Q16851 508 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 FAM83EQ2M2I3 478 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 RGS21Q2M5E4 152 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 GAB4Q2WGN9 574 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 KHDC1Q4VXA5 237 aaKnown RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 IGSF11Q5DX21 431 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 NOMO2Q5JPE7 1267 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 RARS2Q5T160 578 aaKnown RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 GRTP1Q5TC63 336 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 GKAP1Q5VSY0 366 aaPredicted RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 PMF1Q6P1K2 205 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 TUBA3EQ6PEY2 450 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 ZC3H14Q6PJT7 736 aaKnown RBP5.49□□□□□ -1.53
SF1-217ENST00000486960 MOXD1Q6UVY6 613 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 MAMDC4Q6UXC1 1216 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 TPGS1Q6ZTW0 290 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 CAMK1DQ8IU85 385 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 MAPKAPK5Q8IW41 473 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 UBALD2Q8IYN6 164 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 BATF2Q8N1L9 274 aa5.49□□□□□ -1.53
SF1-217ENST00000486960 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms