RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TLR5O60602 858 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 NIPSNAP2O75323 286 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 GMNNO75496 209 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 THRBP10828 461 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 G6PDP11413 515 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 ACVRL1P37023 503 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 GDF5P43026 501 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 CD47Q08722 323 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 KCNAB2Q13303 367 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 PPIL2Q13356 520 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 C9orf131Q5VYM1 1079 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 DCLRE1AQ6PJP8 1040 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 DHRS4L2Q6PKH6 230 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 IL27RAQ6UWB1 636 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 SLC22A9Q8IVM8 553 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 AQP12AQ8IXF9 295 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 CLIP4Q8N3C7 705 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 SIDT2Q8NBJ9 832 aaKnown RBP12.27□□□□□ -0.44
HSPG2-211ENST00000486901 OR13F1Q8NGS4 319 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 ROPN1LQ96C74 230 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 RMDN1Q96DB5 314 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 VAT1Q99536 393 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 HOPXQ9BPY8 73 aaPredicted RBP12.27□□□□□ -0.44
HSPG2-211ENST00000486901 SPON2Q9BUD6 331 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 ABI2Q9NYB9 513 aaPredicted RBP12.27□□□□□ -0.44
HSPG2-211ENST00000486901 CD274Q9NZQ7 290 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 PSME2Q9UL46 239 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 ERGIC3Q9Y282 383 aa12.27□□□□□ -0.44
HSPG2-211ENST00000486901 POLR3HQ9Y535 204 aaPredicted RBP12.27□□□□□ -0.44
HSPG2-211ENST00000486901 CEP290O15078 2479 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 A8MX80 341 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 ECI2O75521 394 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 FADS2O95864 444 aaKnown RBP12.27□□□□□ -0.45
HSPG2-211ENST00000486901 MYL3P08590 195 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 INHBBP09529 407 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 MBL2P11226 248 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-211ENST00000486901 BMP1P13497 986 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 HLCSP50747 726 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 DPY19L1Q2PZI1 675 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 MARC1Q5VT66 337 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 LCN8Q6JVE9 175 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 ALKAL1Q6UXT8 129 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 GCNT7Q6ZNI0 430 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 FEM1CQ96JP0 617 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 BARD1Q99728 777 aaKnown RBP12.27□□□□□ -0.45
HSPG2-211ENST00000486901 IKZF5Q9H5V7 419 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 ZNHIT2Q9UHR6 403 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 ZNF225Q9UK10 706 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 SIP14410 1827 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 E9PAM4 449 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 M0R3G1 203 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 CD3EAPO15446 510 aaKnown RBP12.27□□□□□ -0.45
HSPG2-211ENST00000486901 SNAP91O60641 907 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 SH3BGRLO75368 114 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 GLP2RO95838 553 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 MMP3P08254 477 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 HTR1AP08908 422 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 ADRA1AP35348 466 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 NR4A2P43354 598 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 CLCN5P51795 746 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 HMGCS1Q01581 520 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 EFEMP1Q12805 493 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 NR6A1Q15406 480 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 INAQ16352 499 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 PDCD4Q53EL6 469 aaKnown RBP12.27□□□□□ -0.45
HSPG2-211ENST00000486901 UBXN11Q5T124 520 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 SMYD5Q6GMV2 418 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 TMEM179BQ7Z7N9 219 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 ZDHHC13Q8IUH4 622 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 C8orf59Q8N0T1 100 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-211ENST00000486901 TOP1MTQ969P6 601 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 NTAN1Q96AB6 310 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 CCDC126Q96EE4 140 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 BDH2Q9BUT1 245 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 AMBRA1Q9C0C7 1298 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 MROH8Q9H579 483 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 CNGB3Q9NQW8 809 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.27□□□□□ -0.45
HSPG2-211ENST00000486901 MTRRQ9UBK8 725 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 NOD1Q9Y239 953 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 HS3ST4Q9Y661 456 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 SLC30A1Q9Y6M5 507 aa12.27□□□□□ -0.45
HSPG2-211ENST00000486901 SSC5DA1L4H1 1573 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 LTBP3Q9NS15 1303 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 G3V2T6 193 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 MLYCDO95822 493 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 SNAI1O95863 264 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 CCNCP24863 283 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 SEMG2Q02383 582 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 CHRNB3Q05901 458 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 SYT16Q17RD7 645 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 RAP1GAP2Q684P5 730 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 C8orf82Q6P1X6 216 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 ZNF773Q6PK81 442 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 BHLHA9Q7RTU4 235 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 CNTN4Q8IWV2 1026 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 PPTC7Q8NI37 304 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 CCDC97Q96F63 343 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 CORO1BQ9BR76 489 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 RIBC2Q9H4K1 309 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms