RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 XKR6Q5GH73 641 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 ASRGL1Q7L266 308 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 C2orf15Q8WU43 125 aaKnown RBP13.11□□□□□ -0.31
HMGN1-216ENST00000486741 SUSD6Q92537 303 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 UTP4Q969X6 686 aaKnown RBP13.11□□□□□ -0.31
HMGN1-216ENST00000486741 BRD9Q9H8M2 597 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 ANAPC2Q9UJX6 822 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 USP3Q9Y6I4 520 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 U3KQV3 271 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 ELFN1P0C7U0 828 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 OGNP20774 298 aaKnown RBP13.11□□□□□ -0.31
HMGN1-216ENST00000486741 XKR4Q5GH76 650 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 TXNDC11Q6PKC3 985 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 ZBTB46Q86UZ6 589 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 CPSF7Q8N684 471 aaKnown RBP13.11□□□□□ -0.31
HMGN1-216ENST00000486741 RIN3Q8TB24 985 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 LRTOMTQ8WZ04 291 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 DLG3Q92796 817 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 PTCD3Q96EY7 689 aaKnown RBP13.11□□□□□ -0.31
HMGN1-216ENST00000486741 AARSD1Q9BTE6 412 aaKnown RBP13.11□□□□□ -0.31
HMGN1-216ENST00000486741 CCDC106Q9BWC9 280 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 COMMD8Q9NX08 183 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 PAIP2BQ9ULR5 123 aaKnown RBP13.11□□□□□ -0.31
HMGN1-216ENST00000486741 INSL5Q9Y5Q6 135 aa13.11□□□□□ -0.31
HMGN1-216ENST00000486741 E7ENX8 843 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 STK16O75716 305 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 S1PR4O95977 384 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 FGBP02675 491 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 GPR1P46091 355 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 PRMT9Q6P2P2 845 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 ZBTB2Q8N680 514 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 PNPT1Q8TCS8 783 aaKnown RBP13.1□□□□□ -0.31
HMGN1-216ENST00000486741 OR52E6Q96RD3 313 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 EURLQ9NYK6 297 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 COX7A2P14406 83 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 PTGER3P43115 390 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 CCT8P50990 548 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 NEDD8Q15843 81 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 PLA2G4EQ3MJ16 856 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 OTUD1Q5VV17 481 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-216ENST00000486741 KCNN1Q92952 543 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 TSEN34Q9BSV6 310 aaKnown RBP13.1□□□□□ -0.31
HMGN1-216ENST00000486741 CAPN10Q9HC96 672 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 URB1O60287 2271 aaKnown RBP13.1□□□□□ -0.31
HMGN1-216ENST00000486741 HHLA1C9JL84 531 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 PTGES3LE9PB15 166 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 G3V2L1 256 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 CDK14O94921 469 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 ESR1P03372 595 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 HK2P52789 917 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 AP1S1P61966 158 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 PSAPL1Q6NUJ1 521 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 CYS1Q717R9 158 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 NECAB2Q7Z6G3 386 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 BBS7Q8IWZ6 715 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 SPPL2AQ8TCT8 520 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 TCF12Q99081 682 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 DCUN1D5Q9BTE7 237 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 SIPA1L1O43166 1804 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 HMX2A2RU54 273 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 SNNO75324 88 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-216ENST00000486741 CTGFP29279 349 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 POLR2JP52435 117 aaKnown RBP13.1□□□□□ -0.31
HMGN1-216ENST00000486741 GTF2H2Q13888 395 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 TPGS2Q68CL5 300 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 GTF2H2CQ6P1K8 395 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 CERS6Q6ZMG9 384 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 PHACTR4Q8IZ21 702 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 NT5C3BQ969T7 300 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 RMND5BQ96G75 393 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-216ENST00000486741 PSKH2Q96QS6 385 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 BDH2Q9BUT1 245 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 DOCK1Q14185 1865 aa13.1□□□□□ -0.31
HMGN1-216ENST00000486741 GRM6O15303 877 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 KDELR3O43731 214 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 HS6ST1O60243 411 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 KCNH1O95259 989 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 CKMT2P17540 419 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 MAPK1P28482 360 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 ATG16L2Q8NAA4 619 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 ACTRT2Q8TDY3 377 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 MZB1Q8WU39 189 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 OTULINQ96BN8 352 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 PPP3R2Q96LZ3 170 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 NSUN3Q9H649 340 aaKnown RBP13.09□□□□□ -0.31
HMGN1-216ENST00000486741 SPO11Q9Y5K1 396 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 WNT6Q9Y6F9 365 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 I6L893 689 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-216ENST00000486741 DEAF1O75398 565 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-216ENST00000486741 POU1F1P28069 291 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 CHI3L1P36222 383 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-216ENST00000486741 TM4SF4P48230 202 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 CHN2P52757 468 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 NAE1Q13564 534 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 ZNF276Q8N554 614 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 SMG7Q92540 1137 aaKnown RBP13.09□□□□□ -0.31
HMGN1-216ENST00000486741 HIC2Q96JB3 615 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 FAM83DQ9H4H8 585 aa13.09□□□□□ -0.31
HMGN1-216ENST00000486741 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms