RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 PSAT1Q9Y617 370 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 LAMA5O15230 3695 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 DMXL2Q8TDJ6 3036 aa12.65□□□□□ -0.38
HDAC6-229ENST00000486665 ATXN2Q99700 1313 aaKnown RBP12.64□□□□□ -0.39
HDAC6-229ENST00000486665 DSPP15924 2871 aaKnown RBP12.64□□□□□ -0.39
HDAC6-229ENST00000486665 PLXNA2O75051 1894 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 A0A1W2PR77 199 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 KHNYNO15037 678 aaKnown RBP12.64□□□□□ -0.39
HDAC6-229ENST00000486665 FAM155BO75949 473 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 HAUS5O94927 633 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 SLC25A14O95258 325 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-229ENST00000486665 AHSGP02765 367 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 WNT1P04628 370 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 PYGLP06737 847 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 OGNP20774 298 aaKnown RBP12.64□□□□□ -0.39
HDAC6-229ENST00000486665 ABCG1P45844 678 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 POLD2P49005 469 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 CDK3Q00526 305 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 B4GALNT1Q00973 533 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 TYSND1Q2T9J0 566 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 UAP1L1Q3KQV9 507 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 WDR45BQ5MNZ6 344 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 LYSMD4Q5XG99 296 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 ZNF449Q6P9G9 518 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 UNQ6494/PRO21346Q6UXR6 183 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 Q6ZSR6 202 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 SDCCAG8Q86SQ7 713 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-229ENST00000486665 CTAGE3PQ8IX95 158 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 DEFB124Q8NES8 71 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 OR13H1Q8NG92 308 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 OR2W6PQ8NHA6 318 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 CALML6Q8TD86 181 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 ULK4Q96C45 1275 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 MRRFQ96E11 262 aaKnown RBP12.64□□□□□ -0.39
HDAC6-229ENST00000486665 CYTH2Q99418 400 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 FAM167BQ9BTA0 163 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 WDR26Q9H7D7 661 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 TM9SF3Q9HD45 589 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 AASDHPPTQ9NRN7 309 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 ZDHHC3Q9NYG2 299 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 ZMIZ1Q9ULJ6 1067 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 PRSS21Q9Y6M0 314 aa12.64□□□□□ -0.39
HDAC6-229ENST00000486665 PCDH15Q96QU1 1955 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 IGLV3-16A0A075B6K0 115 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 TMEM202A6NGA9 273 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 PCNX2A6NKB5 2137 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 NDUFS3O75489 264 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 HOXC4P09017 264 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-229ENST00000486665 HOXB3P14651 431 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-229ENST00000486665 GCAP28676 217 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 LEPRP48357 1165 aaKnown RBP12.63□□□□□ -0.39
HDAC6-229ENST00000486665 TMEM115Q12893 351 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-229ENST00000486665 LDLRAP1Q5SW96 308 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 LYPLAL1Q5VWZ2 237 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 KCTD16Q68DU8 428 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 CNSTQ6PJW8 725 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 LAYNQ6UX15 382 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 KYAT3Q6YP21 454 aaKnown RBP12.63□□□□□ -0.39
HDAC6-229ENST00000486665 CERS6Q6ZMG9 384 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 MARK2Q7KZI7 788 aaKnown RBP12.63□□□□□ -0.39
HDAC6-229ENST00000486665 STRA8Q7Z7C7 330 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 ADGRG6Q86SQ4 1221 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 DDHD1Q8NEL9 900 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 GDAP1Q8TB36 358 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 LPGAT1Q92604 370 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 CDKL2Q92772 493 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC6-229ENST00000486665 TCF12Q99081 682 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 COPS8Q99627 209 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 OR2AG1Q9H205 316 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 CAAP1Q9H8G2 361 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 TRIM39Q9HCM9 518 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 PHPT1Q9NRX4 125 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-229ENST00000486665 ZFATQ9P243 1243 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 VPS18Q9P253 973 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 ATXN10Q9UBB4 475 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 PCYT1BQ9Y5K3 369 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-229ENST00000486665 NFS1Q9Y697 457 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 BAHCC1Q9P281 2608 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 NBEAQ8NFP9 2946 aa12.63□□□□□ -0.39
HDAC6-229ENST00000486665 ZNF106Q9H2Y7 1883 aaKnown RBP12.63□□□□□ -0.39
HDAC6-229ENST00000486665 ITPR1Q14643 2758 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 A6NNZ2 444 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 POC1B-GALNT4F8VUJ3 575 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 CACNB4O00305 520 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-229ENST00000486665 SGTAO43765 313 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 ASMTLO95671 621 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 FUCA1P04066 466 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 CEACAM5P06731 702 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 THEGLP0DJG4 465 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 MYCLP1P12525 358 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-229ENST00000486665 ZNF8P17098 575 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-229ENST00000486665 CD38P28907 300 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 FMO4P31512 558 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 RABIFP47224 123 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 TTPAP49638 278 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 KIAA1024LP59773 190 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 YPEL5P62699 121 aa12.62□□□□□ -0.39
HDAC6-229ENST00000486665 RACK1P63244 317 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms