RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 WDR45BQ5MNZ6 344 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 SYT6Q5T7P8 510 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 GPR158Q5T848 1215 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 AGAP6Q5VW22 663 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 SYPL2Q5VXT5 272 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 FAM160B1Q5W0V3 765 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 ISCA2Q86U28 154 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 TMEM199Q8N511 208 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 OR6B3Q8NGW1 331 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 SUN5Q8TC36 379 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 HCAR2Q8TDS4 363 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 SH3RF2Q8TEC5 729 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 PROX1Q92786 737 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 EXT2Q93063 718 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 EGLN2Q96KS0 407 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 NSUN5Q96P11 429 aaKnown RBP10.56□□□□□ -0.72
CCDC171-208ENST00000486641 AGAP4Q96P64 663 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 TBL1YQ9BQ87 522 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 ERVK-6Q9BXR3 956 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 PIGVQ9NUD9 493 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 PGAP2Q9UHJ9 254 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 UTS2RQ9UKP6 389 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 INVSQ9Y283 1065 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 MYLKQ15746 1914 aa10.56□□□□□ -0.72
CCDC171-208ENST00000486641 COL11A1P12107 1806 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 SCN1AP35498 2009 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 IGKV6-21A0A0C4DH24 114 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 A0A1B0GTL3 188 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 SAGE2PA6NJ88 616 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 TBKBP1A7MCY6 615 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 I6L893 689 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 CCRL2O00421 344 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 NCAM2O15394 837 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 HS6ST1O60243 411 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 CRYZL1O95825 349 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ANGPTL1O95841 491 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 BMP1P13497 986 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 RYKP34925 604 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 RPL34P49207 117 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 SLC26A2P50443 739 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 IL5RAQ01344 420 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 CDK10Q15131 360 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 NKG7Q16617 165 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 KANK2Q63ZY3 851 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 DENND5AQ6IQ26 1287 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 TMEM179BQ7Z7N9 219 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 PPHLN1Q8NEY8 458 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 REPS2Q8NFH8 660 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 IPMKQ8NFU5 416 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 TSPEARQ8WU66 669 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ISG20Q96AZ6 181 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ZHX1-C8orf76Q96EF9 292 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 SNX18Q96RF0 628 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 CYP2S1Q96SQ9 504 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 LRRC3Q9BY71 257 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 CXCL16Q9H2A7 254 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 DDX28Q9NUL7 540 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 CRNNQ9UBG3 495 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 MAGEL2Q9UJ55 1249 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 CAB39Q9Y376 341 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 TYW5A2RUC4 315 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 GOLGA8CPA6NN73 597 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 H0Y626 953 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 MTSS1O43312 755 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 TRIM16O95361 564 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 STAU1O95793 577 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 GOT2P00505 430 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ANXA6P08133 673 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 DNAJB2P25686 324 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ST13P50502 369 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 TPI1P60174 286 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 GALK2Q01415 458 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 RAPSNQ13702 412 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 TRIP4Q15650 581 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ZNF404Q494X3 552 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 CEP78Q5JTW2 689 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 SNAP47Q5SQN1 464 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 HECTD2Q5U5R9 776 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ARHGAP17Q68EM7 881 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 LAIR1Q6GTX8 287 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 CES5AQ6NT32 575 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ZCCHC8Q6NZY4 707 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 TUBA3EQ6PEY2 450 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 SPESP1Q6UW49 350 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ENPP6Q6UWR7 440 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 KDELC2Q7Z4H8 507 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 GATAD2AQ86YP4 633 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 SYTL1Q8IYJ3 562 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 NLGN4XQ8N0W4 816 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 ZNF566Q969W8 418 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 PTERQ96BW5 349 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 SLC10A4Q96EP9 437 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 NPY6RQ99463 290 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 RBM4BQ9BQ04 359 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 RHNO1Q9BSD3 238 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 RBM4Q9BWF3 364 aaKnown RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 MMP27Q9H306 513 aa10.55□□□□□ -0.72
CCDC171-208ENST00000486641 FAM124BQ9H5Z6 455 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 CCDC177Q9NQR7 707 aaPredicted RBP10.55□□□□□ -0.72
CCDC171-208ENST00000486641 TREX1Q9NSU2 369 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms