RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 CHRNA6Q15825 494 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 PROX2Q3B8N5 592 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 DOK6Q6PKX4 331 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 PPP1R21Q6ZMI0 780 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 RD3Q7Z3Z2 195 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 LSMEM2Q8N112 164 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 DNAAF3Q8N9W5 541 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 LMX1AQ8TE12 382 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 DNAJC1Q96KC8 554 aaKnown RBP12.77□□□□□ -0.37
SSR4-211ENST00000486204 RANBP9Q96S59 729 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 SLC13A1Q9BZW2 595 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 TMEM168Q9H0V1 697 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 ARFGAP3Q9NP61 516 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 NLE1Q9NVX2 485 aaPredicted RBP12.77□□□□□ -0.37
SSR4-211ENST00000486204 SMOXQ9NWM0 555 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 NLGN3Q9NZ94 848 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 SUFUQ9UMX1 484 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 TMEM98Q9Y2Y6 226 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 PCDHB1Q9Y5F3 818 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 UNC13CQ8NB66 2214 aa12.77□□□□□ -0.37
SSR4-211ENST00000486204 LY6G6EA0A0G2JKS1 128 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 LMO7DNF2Z398 122 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 SIGLEC6O43699 453 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 DNAJC6O75061 913 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 PRAMEF1O95521 474 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 MT-CO3P00414 261 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 TNFP01375 233 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 MPOP05164 745 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 PAFAH1B1P43034 410 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 CDK16Q00536 496 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 PDE1BQ01064 536 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 E2F1Q01094 437 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 SEPT6Q14141 434 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 TCEA2Q15560 299 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 CCDC38Q502W7 563 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 PYCR3Q53H96 274 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 C6orf132Q5T0Z8 1188 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 ZNF648Q5T619 568 aaPredicted RBP12.76□□□□□ -0.37
SSR4-211ENST00000486204 ADGRG6Q86SQ4 1221 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 PHYKPLQ8IUZ5 450 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 KLHL7Q8IXQ5 586 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 FSTL5Q8N475 847 aaPredicted RBP12.76□□□□□ -0.37
SSR4-211ENST00000486204 OR13J1Q8NGT2 312 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 CCL4L1Q8NHW4 92 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 TRIM44Q96DX7 344 aaPredicted RBP12.76□□□□□ -0.37
SSR4-211ENST00000486204 ZNF778Q96MU6 729 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 CARS2Q9HA77 564 aaKnown RBP12.76□□□□□ -0.37
SSR4-211ENST00000486204 ATXN10Q9UBB4 475 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 U3KQA8 63 aa12.76□□□□□ -0.37
SSR4-211ENST00000486204 CCDC78A2IDD5 438 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 HEATR9A2RTY3 570 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 NEMP2A6NFY4 417 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 K7ENP7 123 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 TPP1O14773 563 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 CHUKO15111 745 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 YY2O15391 372 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 NUAK1O60285 661 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 UGT1A9O60656 530 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 MTX2O75431 263 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 SRP72O76094 671 aaKnown RBP12.75□□□□□ -0.37
SSR4-211ENST00000486204 SLC25A14O95258 325 aaPredicted RBP12.75□□□□□ -0.37
SSR4-211ENST00000486204 GP1BBP13224 206 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 UGT1A6P19224 532 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 UGT1A1P22309 533 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 UGT1A4P22310 534 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 IVDP26440 423 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 UGT1A3P35503 534 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 UGT1A5P35504 534 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 ADCY8P40145 1251 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 HADHAP40939 763 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 GNPDA1P46926 289 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 ARSDP51689 593 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 TERF1P54274 439 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 ERVPABLB-1P60509 514 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 GABREP78334 506 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 TMPRSS15P98073 1019 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 ACVR1Q04771 509 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 ITGA9Q13797 1035 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 DEFB133Q30KQ1 61 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 RNASEH2BQ5TBB1 312 aaKnown RBP12.75□□□□□ -0.37
SSR4-211ENST00000486204 LRRC8BQ6P9F7 803 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 INO80CQ6PI98 192 aaPredicted RBP12.75□□□□□ -0.37
SSR4-211ENST00000486204 ATG14Q6ZNE5 492 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 MARK2Q7KZI7 788 aaKnown RBP12.75□□□□□ -0.37
SSR4-211ENST00000486204 ZNF572Q7Z3I7 529 aaPredicted RBP12.75□□□□□ -0.37
SSR4-211ENST00000486204 CAND1Q86VP6 1230 aaKnown RBP12.75□□□□□ -0.37
SSR4-211ENST00000486204 NRROSQ86YC3 692 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 JAMLQ86YT9 394 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 NAT8LQ8N9F0 302 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 DDHD1Q8NEL9 900 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 GPBAR1Q8TDU6 330 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 STYXQ8WUJ0 223 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 CCDC97Q96F63 343 aaPredicted RBP12.75□□□□□ -0.37
SSR4-211ENST00000486204 OR2M4Q96R27 311 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 BOCQ9BWV1 1114 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 UGT1A7Q9HAW7 530 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 UGT1A10Q9HAW8 530 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 UGT1A8Q9HAW9 530 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 TRIM39Q9HCM9 518 aa12.75□□□□□ -0.37
SSR4-211ENST00000486204 TRNAU1APQ9NX07 287 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms