RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 C11orf96Q7Z7L8 435 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 KIAA1328Q86T90 577 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 SLC9B2Q86UD5 537 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 CDKL3Q8IVW4 592 aaPredicted RBP6.92□□□□□ -1.3
VPS50-218ENST00000485994 OR4D9Q8NGE8 314 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 RTP4Q96DX8 246 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 SPATA13Q96N96 652 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 GORASP1Q9BQQ3 440 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 TIMM29Q9BSF4 260 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.92□□□□□ -1.3
VPS50-218ENST00000485994 TSGA10Q9BZW7 698 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 GBA3Q9H227 469 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 EPB41L1Q9H4G0 881 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 PRORYQ9H606 182 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 SMOXQ9NWM0 555 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 GOLGA6AQ9NYA3 693 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 UBP1Q9NZI7 540 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 SIRPGQ9P1W8 387 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 ATXN10Q9UBB4 475 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 ZNHIT2Q9UHR6 403 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 TMPRSS11EQ9UL52 423 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 SATB2Q9UPW6 733 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 SHOC2Q9UQ13 582 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 PLEKHM1Q9Y4G2 1056 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 SPO11Q9Y5K1 396 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 FASNP49327 2511 aaKnown RBP6.92□□□□□ -1.3
VPS50-218ENST00000485994 COL6A6A6NMZ7 2263 aa6.92□□□□□ -1.3
VPS50-218ENST00000485994 IGHV1OR21-1A0A087WYE8 117 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 B4DGG1 531 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.91□□□□□ -1.3
VPS50-218ENST00000485994 GAPDHSO14556 408 aaPredicted RBP6.91□□□□□ -1.3
VPS50-218ENST00000485994 AURKAO14965 403 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 CDK14O94921 469 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 AGTP01019 485 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 PIRTP0C851 137 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 F3P13726 295 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 ZNF7P17097 686 aaPredicted RBP6.91□□□□□ -1.3
VPS50-218ENST00000485994 LPOP22079 712 aaPredicted RBP6.91□□□□□ -1.3
VPS50-218ENST00000485994 CD82P27701 267 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 ALDH4A1P30038 563 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 UGT1A5P35504 534 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 ABCG1P45844 678 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 LIMK2P53671 638 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 OR1D5P58170 312 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 DMPKQ09013 629 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 PRPSAP1Q14558 356 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 LLGL1Q15334 1064 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 ATP13A5Q4VNC0 1218 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 CCDC181Q5TID7 509 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 AGAP9Q5VTM2 703 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 DENND5AQ6IQ26 1287 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 TMEM71Q6P5X7 295 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 DOK6Q6PKX4 331 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 SLC30A9Q6PML9 568 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 WDR74Q6RFH5 385 aaPredicted RBP6.91□□□□□ -1.3
VPS50-218ENST00000485994 CHST15Q7LFX5 561 aaPredicted RBP6.91□□□□□ -1.3
VPS50-218ENST00000485994 ARHGAP22Q7Z5H3 698 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 B3GNT8Q7Z7M8 397 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 TRIM74Q86UV6 250 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 LRRTM4Q86VH4 590 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 PHYKPLQ8IUZ5 450 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 SFTPA2Q8IWL1 248 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 LRRC8AQ8IWT6 810 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 RBM12BQ8IXT5 1001 aaKnown RBP6.91□□□□□ -1.3
VPS50-218ENST00000485994 FBXO39Q8N4B4 442 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 CCDC112Q8NEF3 446 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 DDHD1Q8NEL9 900 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 SLC35B2Q8TB61 432 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 HEXDCQ8WVB3 486 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 HNRNPLLQ8WVV9 542 aaKnown RBP6.91□□□□□ -1.3
VPS50-218ENST00000485994 ZFPM2Q8WW38 1151 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 LRRC45Q96CN5 670 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 ZNF514Q96K75 400 aaPredicted RBP6.91□□□□□ -1.3
VPS50-218ENST00000485994 CMKLR1Q99788 373 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 FSD1LQ9BXM9 530 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 OR2AG1Q9H205 316 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 TBC1D29Q9UFV1 150 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 RSPH14Q9UHP6 348 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 PKP3Q9Y446 797 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 ATRXP46100 2492 aa6.91□□□□□ -1.3
VPS50-218ENST00000485994 IGHV5-10-1A0A0J9YXX1 117 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 TEX51A0A1B0GUA7 166 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 MACROD2A1Z1Q3 448 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 LILRA5A6NI73 299 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 ERI2A8K979 691 aaKnown RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 H7C0S8 307 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 CASC3O15234 703 aaKnown RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 STX7O15400 261 aaKnown RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 TOX3O15405 576 aaPredicted RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 KCNN4O15554 427 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 TNFSF15O95150 251 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 CRTAMO95727 393 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 SPAM1P38567 509 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 HADHAP40939 763 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 CHRNA4P43681 627 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 MAZP56270 477 aaKnown RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 UBE2IP63279 158 aaKnown RBP6.9□□□□□ -1.3
VPS50-218ENST00000485994 XIAPP98170 497 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 HHEXQ03014 270 aa6.9□□□□□ -1.3
VPS50-218ENST00000485994 CFHR1Q03591 330 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms