RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TPP1O14773 563 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 RAD51BO15315 384 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 LATO43561 262 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 NDUFS3O75489 264 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 VIMP08670 466 aaKnown RBP11.2□□□□□ -0.62
SND1-212ENST00000485871 TDGF1P13385 188 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 CD9P21926 228 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 FDXRP22570 491 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 PTGER3P43115 390 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 POLD2P49005 469 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 PGGT1BP53609 377 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 TAS2R39P59534 338 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 ILF2Q12905 390 aaKnown RBP11.2□□□□□ -0.62
SND1-212ENST00000485871 SEPT7Q16181 437 aaKnown RBP11.2□□□□□ -0.62
SND1-212ENST00000485871 HECTD2Q5U5R9 776 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 FAM45BPQ6NSW5 357 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 FOXR1Q6PIV2 292 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 TAS2R42Q7RTR8 314 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 PIGWQ7Z7B1 504 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 CMC1Q7Z7K0 106 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 FAM124AQ86V42 546 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 SLC41A1Q8IVJ1 513 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 CEP97Q8IW35 865 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 RBFAQ8N0V3 343 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 PLA2G15Q8NCC3 412 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 OR2T34Q8NGX1 318 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 FAM45AQ8TCE6 357 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 ACMSDQ8TDX5 336 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 GLYATL1Q969I3 302 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.2□□□□□ -0.62
SND1-212ENST00000485871 FUBP1Q96AE4 644 aaKnown RBP11.2□□□□□ -0.62
SND1-212ENST00000485871 COX14Q96I36 57 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 BTBD1Q9H0C5 482 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 ACTR5Q9H9F9 607 aaPredicted RBP11.2□□□□□ -0.62
SND1-212ENST00000485871 CAB39LQ9H9S4 337 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 MBNL1Q9NR56 388 aaKnown RBP11.2□□□□□ -0.62
SND1-212ENST00000485871 MKS1Q9NXB0 559 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 MBD1Q9UIS9 605 aaPredicted RBP11.2□□□□□ -0.62
SND1-212ENST00000485871 PRSS21Q9Y6M0 314 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 CACNA1IQ9P0X4 2223 aa11.2□□□□□ -0.62
SND1-212ENST00000485871 TBC1D3DA0A087WVF3 549 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 TBC1D3IA0A087WXS9 549 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 TBC1D3EA0A087X179 549 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 TBC1D3KA0A087X1G2 549 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 TBC1D3FA6NER0 549 aaPredicted RBP11.19□□□□□ -0.62
SND1-212ENST00000485871 TBC1D3LB9A6J9 549 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 STK25O00506 426 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 PRMT5O14744 637 aaPredicted RBP11.19□□□□□ -0.62
SND1-212ENST00000485871 TYROBPO43914 113 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 SEMA4FO95754 770 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 PAK4O96013 591 aaPredicted RBP11.19□□□□□ -0.62
SND1-212ENST00000485871 MT-ND3P03897 115 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 TBC1D3HP0C7X1 549 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 PKMP14618 531 aaKnown RBP11.19□□□□□ -0.62
SND1-212ENST00000485871 PMLP29590 882 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 HOXA6P31267 233 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 IGFALSP35858 605 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 TRIM23P36406 574 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 GMPRP36959 345 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 CXCL12P48061 93 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 SERPINB8P50452 374 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 CDKN2DP55273 166 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 POU4F1Q01851 419 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 IRF4Q15306 451 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 TBC1D3GQ6DHY5 549 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 TBC1D3CQ6IPX1 549 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 PNCKQ6P2M8 343 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 C6orf89Q6UWU4 347 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 MACC1Q6ZN28 852 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 CCDC121Q6ZUS5 278 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 TBC1D3Q8IZP1 549 aaPredicted RBP11.19□□□□□ -0.62
SND1-212ENST00000485871 PGBD3Q8N328 593 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 FRMD1Q8N878 549 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 GBP7Q8N8V2 638 aaPredicted RBP11.19□□□□□ -0.62
SND1-212ENST00000485871 ANKRD42Q8N9B4 389 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 BANPQ8N9N5 519 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 LKAAEAR1Q8TD35 194 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 DENND1AQ8TEH3 1009 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 KLK6Q92876 244 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 COPS8Q99627 209 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 SLC17A9Q9BYT1 436 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 TPSD1Q9BZJ3 242 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 EBF2Q9HAK2 575 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 PRMT8Q9NR22 394 aaPredicted RBP11.19□□□□□ -0.62
SND1-212ENST00000485871 SNX15Q9NRS6 342 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 SLC39A10Q9ULF5 831 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 CYP8B1Q9UNU6 501 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 PCDHB1Q9Y5F3 818 aa11.19□□□□□ -0.62
SND1-212ENST00000485871 ZFC3H1O60293 1989 aaKnown RBP11.18□□□□□ -0.62
SND1-212ENST00000485871 UBA6A0AVT1 1052 aaPredicted RBP11.18□□□□□ -0.62
SND1-212ENST00000485871 LRRC72A6NJI9 287 aa11.18□□□□□ -0.62
SND1-212ENST00000485871 PHGDHO43175 533 aaKnown RBP11.18□□□□□ -0.62
SND1-212ENST00000485871 NIPSNAP2O75323 286 aa11.18□□□□□ -0.62
SND1-212ENST00000485871 ZNF217O75362 1048 aa11.18□□□□□ -0.62
SND1-212ENST00000485871 MTX2O75431 263 aa11.18□□□□□ -0.62
SND1-212ENST00000485871 ASMTLO95671 621 aa11.18□□□□□ -0.62
SND1-212ENST00000485871 ESR1P03372 595 aa11.18□□□□□ -0.62
SND1-212ENST00000485871 IGHV4-34P06331 123 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms