RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ELOCQ15369 112 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 CCNG2Q16589 344 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 P3H1Q32P28 736 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 INAVAQ3KP66 663 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 ZNF658BQ4V348 819 aaPredicted RBP5.67□□□□□ -1.5
CUX1-208ENST00000485792 PYCR3Q53H96 274 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 ALKBH2Q6NS38 261 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 GUSBP11Q6P575 273 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 IGF2-ASQ6U949 168 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 PID1Q7Z2X4 250 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 KDELC2Q7Z4H8 507 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 C11orf96Q7Z7L8 435 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 TMPRSS12Q86WS5 348 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 HEATR4Q86WZ0 1026 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 CCDC50Q8IVM0 306 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 ZNF547Q8IVP9 402 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 SLC35F3Q8IY50 421 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 NDUFAF2Q8N183 169 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 CHCHD4Q8N4Q1 142 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 SVOPQ8N4V2 548 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 EID2Q8N6I1 236 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 DCBLD1Q8N8Z6 715 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 KYQ8NBH2 561 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 TRIM58Q8NG06 486 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 CCDC110Q8TBZ0 833 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 SETD7Q8WTS6 366 aaKnown RBP5.67□□□□□ -1.5
CUX1-208ENST00000485792 PDCD6IPQ8WUM4 868 aaKnown RBP5.67□□□□□ -1.5
CUX1-208ENST00000485792 TSACCQ96A04 125 aaPredicted RBP5.67□□□□□ -1.5
CUX1-208ENST00000485792 AP2M1Q96CW1 435 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 HIC2Q96JB3 615 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 CNDP2Q96KP4 475 aaKnown RBP5.67□□□□□ -1.5
CUX1-208ENST00000485792 APOL2Q9BQE5 337 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 FAM83DQ9H4H8 585 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 WDR26Q9H7D7 661 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 ZFYVE1Q9HBF4 777 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 PLAC1Q9HBJ0 212 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 ARFGAP3Q9NP61 516 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 IL26Q9NPH9 171 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 SMOXQ9NWM0 555 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 PIH1D1Q9NWS0 290 aaKnown RBP5.67□□□□□ -1.5
CUX1-208ENST00000485792 DNAJC28Q9NX36 388 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.67□□□□□ -1.5
CUX1-208ENST00000485792 NCKIPSDQ9NZQ3 722 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 HACD3Q9P035 362 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 SPASTQ9UBP0 616 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 APPL1Q9UKG1 709 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 NEU2Q9Y3R4 380 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 ZNF711Q9Y462 761 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 DOCK10Q96BY6 2186 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 MED13Q9UHV7 2174 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 COL6A6A6NMZ7 2263 aa5.67□□□□□ -1.5
CUX1-208ENST00000485792 KALRNO60229 2985 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 IGLV3-16A0A075B6K0 115 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 TRBV5-4A0A0C4DH59 114 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 C1orf232A0A0U1RR37 186 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 TCRBV7S3A2A0A539 114 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 GOLGA6L3A6NEY3 463 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 MROH6A6NGR9 719 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ERI2A8K979 691 aaKnown RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 CACNB4O00305 520 aaPredicted RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 LDB2O43679 373 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 NUAK1O60285 661 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 MTX2O75431 263 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 RFPL3O75679 317 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ANXA9O76027 345 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 AGTP01019 485 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ATP1A1P05023 1023 aaKnown RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 FGF1P05230 155 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 KELP23276 732 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 AK4P27144 223 aaPredicted RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 CSF2RBP32927 897 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 CETN2P41208 172 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 MAGEA6P43360 314 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ZNF140P52738 457 aaPredicted RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 GEMP55040 296 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 B4GALNT1Q00973 533 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 E2F1Q01094 437 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 CFHR1Q03591 330 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ACVR1Q04771 509 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 SEMA5AQ13591 1074 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 LRP8Q14114 963 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 SPARCL1Q14515 664 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 HLTFQ14527 1009 aaKnown RBP eCLIP5.66□□□□□ -1.5
CUX1-208ENST00000485792 RTP5Q14D33 572 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 RPS6KA1Q15418 735 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 PCSK7Q16549 785 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 CYP1B1Q16678 543 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 PARP6Q2NL67 630 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 DEFB133Q30KQ1 61 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 PRRT3Q5FWE3 981 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ZFYVE27Q5T4F4 411 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 CFAP58Q5T655 872 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ZDHHC20Q5W0Z9 365 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ITPRIPL1Q6GPH6 555 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ENPP7Q6UWV6 458 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 DHRS13Q6UX07 377 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 ATCAYQ86WG3 371 aa5.66□□□□□ -1.5
CUX1-208ENST00000485792 CDKL3Q8IVW4 592 aaPredicted RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 TAB3Q8N5C8 712 aaPredicted RBP5.66□□□□□ -1.5
CUX1-208ENST00000485792 TRAM1L1Q8N609 369 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms