RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 OSGEPL1Q9H4B0 414 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 DOLKQ9UPQ8 538 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 DGKBQ9Y6T7 804 aa11.73□□□□□ -0.53
APTX-227ENST00000485479 ZCWPW2A0A1B0GU75 182 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 SPAARA0A1B0GVQ0 90 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 B4DGG1 531 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 H7C0S8 307 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 TOR1BO14657 336 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 GRID2O43424 1007 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 SIGLEC6O43699 453 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 NUAK1O60285 661 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 PYGLP06737 847 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 HOXC4P09017 264 aaPredicted RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 MLNP12872 115 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 MSH3P20585 1137 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 RPL10P27635 214 aaKnown RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 ACTR1BP42025 376 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 ACTR1AP61163 376 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 ACVR1Q04771 509 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 CACNG1Q06432 222 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 ANKRD20A4Q4UJ75 823 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 UBAP2Q5T6F2 1119 aaKnown RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 PDPK2PQ6A1A2 396 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 TMEM220Q6QAJ8 160 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 AFTPHQ6ULP2 937 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 RAVER1Q8IY67 606 aaKnown RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 ZBED8Q8IZ13 594 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 PDIK1LQ8N165 341 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 OXR1Q8N573 874 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 CEP112Q8N8E3 955 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 IFT81Q8WYA0 676 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 FAM136AQ96C01 138 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 RAB17Q9H0T7 212 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 SPATS2LQ9NUQ6 558 aaKnown RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 SPASTQ9UBP0 616 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 PIKFYVEQ9Y2I7 2098 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 IQCF5A8MTL0 148 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 TNFRSF10CO14798 259 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 PCDHGA12O60330 932 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 SNX2O60749 519 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 IVLP07476 585 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 ITGB6P18564 788 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 ABCG1P45844 678 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 ARCN1P48444 511 aaKnown RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 BLKP51451 505 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 DRG2P55039 364 aaKnown RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 ARL4CP56559 192 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 CLDN6P56747 220 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 CRYMQ14894 314 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 INSCQ1MX18 579 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 FASTKD1Q53R41 847 aaKnown RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 ZNF789Q5FWF6 425 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 TEX35Q5T0J7 233 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 TRMT10BQ6PF06 316 aaKnown RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 DENND6AQ8IWF6 608 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 GSPT2Q8IYD1 628 aaKnown RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 FBXO36Q8NEA4 188 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 FAM46DQ8NEK8 389 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 COPS8Q99627 209 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 DPEP2Q9H4A9 486 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 L2HGDHQ9H9P8 463 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 KLC4Q9NSK0 619 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 CATSPERZQ9NTU4 200 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 SMOXQ9NWM0 555 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 WHRNQ9P202 907 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 VPS18Q9P253 973 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
APTX-227ENST00000485479 PCOLCE2Q9UKZ9 415 aa11.72□□□□□ -0.53
APTX-227ENST00000485479 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
APTX-227ENST00000485479 TRBV5-4A0A0C4DH59 114 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 FAM237BA0A1B0GVD1 139 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 AGAP14A8MT82 685 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 SLC30A4O14863 429 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 TM4SF5O14894 197 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 SGTAO43765 313 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 ERVK-10P10266 1014 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 NOVA1P51513 510 aaKnown RBP11.71□□□□□ -0.53
APTX-227ENST00000485479 TUBB2AQ13885 445 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 BRD3Q15059 726 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 ELOCQ15369 112 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 LDLRAP1Q5SW96 308 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 UNC5AQ6ZN44 842 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 C11orf96Q7Z7L8 435 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 TMEM135Q86UB9 458 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 ART4Q93070 314 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 C9orf72Q96LT7 481 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 EBNA1BP2Q99848 306 aaKnown RBP11.71□□□□□ -0.53
APTX-227ENST00000485479 TUBB2BQ9BVA1 445 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 SAYSD1Q9NPB0 183 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 C20orf96Q9NUD7 363 aaPredicted RBP11.71□□□□□ -0.53
APTX-227ENST00000485479 GULP1Q9UBP9 304 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 PCNX2A6NKB5 2137 aa11.71□□□□□ -0.53
APTX-227ENST00000485479 AP3B1O00203 1094 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 CHUKO15111 745 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 CD3EAPO15446 510 aaKnown RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 FLRT2O43155 660 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 DFNA5O60443 496 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 FOXD2O60548 495 aaPredicted RBP11.7□□□□□ -0.54
APTX-227ENST00000485479 CBFA2T3O75081 653 aa11.7□□□□□ -0.54
APTX-227ENST00000485479 ANXA6P08133 673 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms