RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SSU72P8A0A1W2PR75 194 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 GPR89AB7ZAQ6 455 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 PPP1R12AO14974 1030 aaPredicted RBP18.94■□□□□ 0.62
COL27A1-205ENST00000485397 KMOO15229 486 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 AKR1B10O60218 316 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 UBXN7O94888 489 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 ANKRD34CP0C6C1 535 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 GPR89BP0CG08 455 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 TNNT1P13805 278 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 AMD1P17707 334 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 NOP2P46087 812 aaKnown RBP18.94■□□□□ 0.62
COL27A1-205ENST00000485397 LEPRP48357 1165 aaKnown RBP18.94■□□□□ 0.62
COL27A1-205ENST00000485397 SEPHS1P49903 392 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 FOXM1Q08050 763 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 SKIDA1Q1XH10 827 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 TEX44Q53QW1 395 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 ATP1A1-AS1Q5TC04 95 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 VSIG1Q86XK7 387 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 ZNF547Q8IVP9 402 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 TGM7Q96PF1 710 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 DNAJC7Q99615 494 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 CHP1Q99653 195 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 EFHD1Q9BUP0 239 aa18.94■□□□□ 0.62
COL27A1-205ENST00000485397 PRR19A6NJB7 356 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 PMPCBO75439 489 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 CDK14O94921 469 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 NDST3O95803 873 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 BRAFP15056 766 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 ZFXP17010 805 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-205ENST00000485397 ZNF28P17035 718 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 F8A1P23610 371 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 PTPN3P26045 913 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 RPL10P27635 214 aaKnown RBP18.93■□□□□ 0.62
COL27A1-205ENST00000485397 ARHGAP25P42331 645 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 DRG2P55039 364 aaKnown RBP18.93■□□□□ 0.62
COL27A1-205ENST00000485397 SH3BP2P78314 561 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 DEFB109BQ30KR1 87 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 C16orf46Q6P387 395 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 MFSD7Q6UXD7 560 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 STARD8Q92502 1023 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 TIMM29Q9BSF4 260 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 TRIT1Q9H3H1 467 aaKnown RBP18.93■□□□□ 0.62
COL27A1-205ENST00000485397 ZNF71Q9NQZ8 489 aaPredicted RBP18.93■□□□□ 0.62
COL27A1-205ENST00000485397 SPTLC3Q9NUV7 552 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 TRIM10Q9UDY6 481 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 TUBD1Q9UJT1 453 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 HYOU1Q9Y4L1 999 aa18.93■□□□□ 0.62
COL27A1-205ENST00000485397 MRPS18BQ9Y676 258 aaKnown RBP18.93■□□□□ 0.62
COL27A1-205ENST00000485397 OR52A4PA6NMU1 304 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 VEGFDO43915 354 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 STAT5AP42229 794 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 NOMO1Q15155 1222 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 SLC14A2Q15849 920 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 ATP13A5Q4VNC0 1218 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 CCDC70Q6NSX1 233 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 ABRAXAS1Q6UWZ7 409 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 ESX1Q8N693 406 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 RSC1A1Q92681 617 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 TEKT5Q96M29 485 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 POT1Q9NUX5 634 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 SAE1Q9UBE0 346 aaPredicted RBP18.92■□□□□ 0.62
COL27A1-205ENST00000485397 RPS6KL1Q9Y6S9 549 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 BOD1L1Q8NFC6 3051 aa18.92■□□□□ 0.62
COL27A1-205ENST00000485397 A0A0A6YYK5 440 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-205ENST00000485397 KIF1CO43896 1103 aaKnown RBP18.91■□□□□ 0.62
COL27A1-205ENST00000485397 TPM3P06753 285 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 TCN2P20062 427 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 CD68P34810 354 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-205ENST00000485397 MAP7Q14244 749 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 LLGL1Q15334 1064 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 LRRC38Q5VT99 294 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 C11orf96Q7Z7L8 435 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 C9orf43Q8TAL5 461 aaPredicted RBP18.91■□□□□ 0.62
COL27A1-205ENST00000485397 ELMO2Q96JJ3 720 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 OR6C1Q96RD1 312 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 ULBP3Q9BZM4 244 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 EPN3Q9H201 632 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 ZNF768Q9H5H4 540 aaKnown RBP18.91■□□□□ 0.62
COL27A1-205ENST00000485397 SLC40A1Q9NP59 571 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 ZNHIT6Q9NWK9 470 aaKnown RBP18.91■□□□□ 0.62
COL27A1-205ENST00000485397 WDR37Q9Y2I8 494 aa18.91■□□□□ 0.62
COL27A1-205ENST00000485397 RASSF9O75901 435 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 IDSP22304 550 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 MC1RQ01726 317 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 TMEM115Q12893 351 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-205ENST00000485397 GPR18Q14330 331 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 PRKD1Q15139 912 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-205ENST00000485397 ODF2Q5BJF6 829 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 AGAP9Q5VTM2 703 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 WASH2PQ6VEQ5 465 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 FAM92BQ6ZTR7 304 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 TRAPPC5Q8IUR0 188 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 RHOT2Q8IXI1 618 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 RHOT1Q8IXI2 618 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 GALNT6Q8NCL4 622 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 GDAP1Q8TB36 358 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 CXorf40BQ96DE9 158 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 ABHD17AQ96GS6 310 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 VPS35Q96QK1 796 aa18.9■□□□□ 0.62
COL27A1-205ENST00000485397 SRPK1Q96SB4 655 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms