RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 OPA1O60313 960 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 MTX2O75431 263 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 MYF5P13349 255 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 ZNF7P17097 686 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-213ENST00000485080 VPS41P49754 854 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 ARSDP51689 593 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 TMPRSS15P98073 1019 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 DMPKQ09013 629 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 NR1D2Q14995 579 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 CCDC38Q502W7 563 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 WASH2PQ6VEQ5 465 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 SYT10Q6XYQ8 523 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 CHST15Q7LFX5 561 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-213ENST00000485080 ZNF438Q7Z4V0 828 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 CAND1Q86VP6 1230 aaKnown RBP17.53■□□□□ 0.4
SREBF1-213ENST00000485080 NAGSQ8N159 534 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 NAT8LQ8N9F0 302 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 PPHLN1Q8NEY8 458 aaKnown RBP17.53■□□□□ 0.4
SREBF1-213ENST00000485080 LINC00615Q96LM1 132 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-213ENST00000485080 KIFC1Q9BW19 673 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 SCNM1Q9BWG6 230 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 SUDS3Q9H7L9 328 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-213ENST00000485080 WASH6PQ9NQA3 447 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 CRLS1Q9UJA2 301 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 MSRB2Q9Y3D2 182 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 PRKAB1Q9Y478 270 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 UNC13CQ8NB66 2214 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 IGF2RP11717 2491 aa17.53■□□□□ 0.4
SREBF1-213ENST00000485080 FRYQ5TBA9 3013 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 CPED1A4D0V7 1026 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 OR5K4A6NMS3 321 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 TUBB4AP04350 444 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 ACP5P13686 325 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 MSH3P20585 1137 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 ACRV1P26436 265 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 MAGEA3P43357 314 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 FASLGP48023 281 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 SESN2P58004 480 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-213ENST00000485080 B4GALNT1Q00973 533 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 INSM1Q01101 510 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-213ENST00000485080 PPP1R7Q15435 360 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 BCL7AQ4VC05 210 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 CDCP2Q5VXM1 449 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 ANKRD22Q5VYY1 191 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 CCNI2Q6ZMN8 369 aaPredicted RBP17.52■□□□□ 0.4
SREBF1-213ENST00000485080 ZNF778Q96MU6 729 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 COPS8Q99627 209 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 TREX1Q9NSU2 369 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 ZDHHC3Q9NYG2 299 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.52■□□□□ 0.4
SREBF1-213ENST00000485080 SIRPGQ9P1W8 387 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 TBC1D29Q9UFV1 150 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 SLC23A2Q9UGH3 650 aa17.52■□□□□ 0.4
SREBF1-213ENST00000485080 FREM2Q5SZK8 3169 aa17.52■□□□□ 0.39
SREBF1-213ENST00000485080 MAGEB16A2A368 324 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 CCDC162PA2VCL2 907 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 B4DGG1 531 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 CFAP99D6REC4 459 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 CCL22O00626 93 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 SGTAO43765 313 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 TCEA3O75764 348 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 TMEM63AO94886 807 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 TOP3BO95985 862 aaKnown RBP17.51■□□□□ 0.39
SREBF1-213ENST00000485080 RALBP11234 206 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 SLC2A4P14672 509 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 VCLP18206 1134 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 IVDP26440 423 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 FOXN2P32314 431 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 GPR3P46089 330 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 CTSCP53634 463 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 DHX34Q14147 1143 aaKnown RBP17.51■□□□□ 0.39
SREBF1-213ENST00000485080 ITIH4Q14624 930 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 PERM1Q5SV97 790 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 RNASEH2BQ5TBB1 312 aaKnown RBP17.51■□□□□ 0.39
SREBF1-213ENST00000485080 AGAP9Q5VTM2 703 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 IYDQ6PHW0 289 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 TMEM220Q6QAJ8 160 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 AFTPHQ6ULP2 937 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 PCGF5Q86SE9 256 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 SERPINA9Q86WD7 417 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 TRAPPC5Q8IUR0 188 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 PPIL6Q8IXY8 311 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 PIANPQ8IYJ0 282 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 SFRP1Q8N474 314 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 ARL14Q8N4G2 192 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 DCBLD1Q8N8Z6 715 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 AVL9Q8NBF6 648 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 MAPK15Q8TD08 544 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 HDAC10Q969S8 669 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 CHRAC1Q9NRG0 131 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 KLC4Q9NSK0 619 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 SLC2A6Q9UGQ3 507 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 SOX13Q9UN79 622 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 KCNK6Q9Y257 313 aa17.51■□□□□ 0.39
SREBF1-213ENST00000485080 KIR2DS5A0A0G2JLQ3 304 aa17.5■□□□□ 0.39
SREBF1-213ENST00000485080 A0A0G2JNG1 304 aa17.5■□□□□ 0.39
SREBF1-213ENST00000485080 KIR2DS3K7RE56 304 aa17.5■□□□□ 0.39
SREBF1-213ENST00000485080 NTN3O00634 580 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-213ENST00000485080 F3P13726 295 aa17.5■□□□□ 0.39
SREBF1-213ENST00000485080 AKT1P31749 480 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms