RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 DNPEPQ9ULA0 475 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 CCPG1Q9ULG6 757 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 GRID1Q9ULK0 1009 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 PRPF19Q9UMS4 504 aaKnown RBP4.83□□□□□ -1.64
SSBP1-211ENST00000484178 ARFGEF1Q9Y6D6 1849 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 LY75O60449 1722 aa4.83□□□□□ -1.64
SSBP1-211ENST00000484178 SLX4Q8IY92 1834 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 A0A0B4J269 797 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 A0A0G2JND7 137 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TCRBV5S1A1TA0A578 114 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 DDTLA6NHG4 134 aaPredicted RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 DRGXA6NNA5 263 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 HACD1B0YJ81 288 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TISP43B9A030 160 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 B9A039 149 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 FCHO1O14526 889 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 CASQ2O14958 399 aaPredicted RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 CCNT2O60583 730 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ATP9AO75110 1047 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 GLRA3O75311 464 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ASS1P00966 412 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 POLBP06746 335 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ANPEPP15144 967 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ATF7P17544 494 aaPredicted RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TPSB2P20231 275 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 FDXRP22570 491 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 GLRA2P23416 452 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 CTSSP25774 331 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ATICP31939 592 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 GARSP41250 739 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 SLC6A9P48067 706 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 NR2C2P49116 596 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 PTH2RP49190 550 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 RPS6KA3P51812 740 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 RBM5P52756 815 aaKnown RBP eCLIP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 HSPA2P54652 639 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 NLRP11P59045 1033 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ROR1Q01973 937 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TLE1Q04724 770 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 FOXF2Q12947 444 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TARDBPQ13148 414 aaKnown RBP eCLIP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 MED21Q13503 144 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 PTK2BQ14289 1009 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 RAB39AQ14964 217 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TPSAB1Q15661 275 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 SLC1A5Q15758 541 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 CCDC14Q49A88 953 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 EFHC1Q5JVL4 640 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 IRAK1BP1Q5VVH5 260 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TANGO2Q6ICL3 276 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 FAM180AQ6UWF9 173 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ANO5Q75V66 913 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 BEND5Q7L4P6 421 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 LRRTM4Q86VH4 590 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 PSTKQ8IV42 348 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 CROCCP3Q8IVE0 287 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 CDKL3Q8IVW4 592 aaPredicted RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 BRSK2Q8IWQ3 736 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 CELF5Q8N6W0 485 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 DRAXINQ8NBI3 349 aaPredicted RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 FBXO36Q8NEA4 188 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 KBTBD7Q8WVZ9 684 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ZNF606Q8WXB4 792 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ATG4AQ8WYN0 398 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 OPTNQ96CV9 577 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 CEP170P1Q96L14 293 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 VRK1Q99986 396 aaPredicted RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 GDF15Q99988 308 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ECSITQ9BQ95 431 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 C11orf70Q9BRQ4 267 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 SPATA5L1Q9BVQ7 753 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 HEMGNQ9BXL5 484 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 EIF2AQ9BY44 585 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TRIM54Q9BYV2 358 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 DPH1Q9BZG8 443 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 WDCPQ9H6R7 721 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 SLC38A10Q9HBR0 1119 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 MRM3Q9HC36 420 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 SARS2Q9NP81 518 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 SERHLQ9NQF3 203 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TM7SF3Q9NS93 570 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 NRBP2Q9NSY0 501 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 SEMA4GQ9NTN9 838 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TMEM74BQ9NUR3 256 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 TAS2R1Q9NYW7 299 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 RBAKQ9NYW8 714 aaPredicted RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 PTTG2Q9NZH5 202 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 FAM30AQ9NZY2 134 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 RNF181Q9P0P0 153 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 DLGAP2Q9P1A6 1054 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 SLC9A2Q9UBY0 812 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 DCDC2Q9UHG0 476 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 CPA4Q9UI42 421 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 XPO7Q9UIA9 1087 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 VPS28Q9UK41 221 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ADAM28Q9UKQ2 775 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 ATP11BQ9Y2G3 1177 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 R3HDM2Q9Y2K5 976 aaKnown RBP4.82□□□□□ -1.64
SSBP1-211ENST00000484178 PLLPQ9Y342 182 aa4.82□□□□□ -1.64
SSBP1-211ENST00000484178 C2CD2Q9Y426 696 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms