RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 MUL1Q969V5 352 aa14.18□□□□□ -0.14
COL9A2-207ENST00000482722 VMP1Q96GC9 406 aa14.18□□□□□ -0.14
COL9A2-207ENST00000482722 RNF145Q96MT1 663 aa14.18□□□□□ -0.14
COL9A2-207ENST00000482722 KCTD14Q9BQ13 255 aaPredicted RBP14.18□□□□□ -0.14
COL9A2-207ENST00000482722 MPP6Q9NZW5 540 aa14.18□□□□□ -0.14
COL9A2-207ENST00000482722 ZNF229Q9UJW7 825 aa14.18□□□□□ -0.14
COL9A2-207ENST00000482722 PADI3Q9ULW8 664 aa14.18□□□□□ -0.14
COL9A2-207ENST00000482722 BTRCQ9Y297 605 aa14.18□□□□□ -0.14
COL9A2-207ENST00000482722 TRPM7Q96QT4 1865 aa14.18□□□□□ -0.14
COL9A2-207ENST00000482722 MAN1A2O60476 641 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 F9P00740 461 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 CYBAP13498 195 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 ALDH4A1P30038 563 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 KPNA2P52292 529 aaKnown RBP14.17□□□□□ -0.14
COL9A2-207ENST00000482722 GP2P55259 537 aaKnown RBP14.17□□□□□ -0.14
COL9A2-207ENST00000482722 LIPEQ05469 1076 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 ITKQ08881 620 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 ACAP2Q15057 778 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 MEP1AQ16819 746 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 XKR4Q5GH76 650 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 DENND5AQ6IQ26 1287 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 CLIP4Q8N3C7 705 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 NDNFQ8TB73 568 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 OSCP1Q8WVF1 389 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 BIRC7Q96CA5 298 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 BTN2A3PQ96KV6 586 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 TMEM209Q96SK2 561 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 VAT1Q99536 393 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 ALOXE3Q9BYJ1 711 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 NTN4Q9HB63 628 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 HPS4Q9NQG7 708 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 AAR2Q9Y312 384 aaKnown RBP14.17□□□□□ -0.14
COL9A2-207ENST00000482722 PCDHGA8Q9Y5G5 932 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 ANKRD34BA5PLL1 514 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 KPNA6O60684 536 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 SLC4A1P02730 911 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 HCAR3P49019 387 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 CXCR3P49682 368 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 AIF1P55008 147 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 LSM3P62310 102 aaKnown RBP14.17□□□□□ -0.14
COL9A2-207ENST00000482722 SH3BP2P78314 561 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 ECT2LQ008S8 904 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 UGT3A1Q6NUS8 523 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 CNTN4Q8IWV2 1026 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 MIER2Q8N344 545 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 LEMD2Q8NC56 503 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 SMARCD1Q96GM5 515 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 TMEM74Q96NL1 305 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 RBM22Q9NW64 420 aaKnown RBP eCLIP14.17□□□□□ -0.14
COL9A2-207ENST00000482722 DNAJC15Q9Y5T4 150 aa14.17□□□□□ -0.14
COL9A2-207ENST00000482722 M0QZ92 97 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 B3GAT3O94766 335 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 NADKO95544 446 aaPredicted RBP14.16□□□□□ -0.14
COL9A2-207ENST00000482722 THP07101 528 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 THRBP10828 461 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 ALDH3A2P51648 485 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 NEK2P51955 445 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 SLC13A2Q13183 592 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 DAG1Q14118 895 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 AGAP9Q5VTM2 703 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 TMEM236Q5W0B7 351 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 C8orf59Q8N0T1 100 aaPredicted RBP14.16□□□□□ -0.14
COL9A2-207ENST00000482722 CLEC4FQ8N1N0 589 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 C2CD4AQ8NCU7 369 aaPredicted RBP14.16□□□□□ -0.14
COL9A2-207ENST00000482722 BDH2Q9BUT1 245 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 SLC39A8Q9C0K1 460 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 HOXD1Q9GZZ0 328 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 SLAMF8Q9P0V8 285 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 PDE10AQ9Y233 779 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 PCDHB3Q9Y5E6 796 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 PMF1-BGLAPU3KQ54 211 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 TET1Q8NFU7 2136 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 TMEM88BA6NKF7 163 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 C16orf96A6NNT2 1141 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 PIP5K1BO14986 540 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 ALPLP05186 524 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 HLA-DQB2P05538 268 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 LTA4HP09960 611 aaKnown RBP14.16□□□□□ -0.14
COL9A2-207ENST00000482722 LINC00032P0C843 101 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 AGXTP21549 392 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 LHX1P48742 406 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 MAXP61244 160 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 RPS6KA2Q15349 733 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 CTU2Q2VPK5 515 aaKnown RBP14.16□□□□□ -0.14
COL9A2-207ENST00000482722 TIGD5Q53EQ6 642 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 TAF2Q6P1X5 1199 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 TMEM207Q6UWW9 146 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 BHLHA9Q7RTU4 235 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 STK32CQ86UX6 486 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 MMAAQ8IVH4 418 aaKnown RBP14.16□□□□□ -0.14
COL9A2-207ENST00000482722 ATP6V0D2Q8N8Y2 350 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 CHDHQ8NE62 594 aaPredicted RBP14.16□□□□□ -0.14
COL9A2-207ENST00000482722 HTRA1Q92743 480 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 HDAC2Q92769 488 aaKnown RBP14.16□□□□□ -0.14
COL9A2-207ENST00000482722 CCDC126Q96EE4 140 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 NSUN5Q96P11 429 aaKnown RBP14.16□□□□□ -0.14
COL9A2-207ENST00000482722 TOR3AQ9H497 397 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 NOL6Q9H6R4 1146 aaKnown RBP14.16□□□□□ -0.14
COL9A2-207ENST00000482722 GLOD4Q9HC38 313 aa14.16□□□□□ -0.14
COL9A2-207ENST00000482722 MAGEE1Q9HCI5 957 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms