RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 K7ENP7 123 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 ERVH48-1M5A8F1 160 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 HGSO14964 777 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-212ENST00000482251 NVLO15381 856 aaKnown RBP10.32□□□□□ -0.76
CPSF4-212ENST00000482251 KCNN4O15554 427 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 UGT1A9O60656 530 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 CDK14O94921 469 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 FTCDO95954 541 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 AGTP01019 485 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 FGF3P11487 239 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-212ENST00000482251 SLC2A4P14672 509 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 ZNF7P17097 686 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-212ENST00000482251 UGT1A6P19224 532 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 HLA-DPA1P20036 260 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 UGT1A1P22309 533 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 UGT1A4P22310 534 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 CSTF2P33240 577 aaKnown RBP eCLIP10.32□□□□□ -0.76
CPSF4-212ENST00000482251 UGT1A3P35503 534 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 HMGCLP35914 325 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 ARSDP51689 593 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 VAV2P52735 878 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 GFERP55789 205 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 RWDD2BP57060 319 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 MPP3Q13368 585 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 GTF2H3Q13889 308 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 LY6DQ14210 128 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 MANEAQ5SRI9 462 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 PDPK2PQ6A1A2 396 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 TMEM71Q6P5X7 295 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 INO80CQ6PI98 192 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-212ENST00000482251 MICALCLQ6ZW33 695 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 DET1Q7L5Y6 550 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 CDKL3Q8IVW4 592 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-212ENST00000482251 TRIM48Q8IWZ4 208 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 AGBL5Q8NDL9 886 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 CCDC110Q8TBZ0 833 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 PLEKHG4BQ96PX9 1271 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 VAT1Q99536 393 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 CTRCQ99895 268 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 BAG1Q99933 345 aaPredicted RBP10.32□□□□□ -0.76
CPSF4-212ENST00000482251 SEMA4CQ9C0C4 833 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 UGT1A7Q9HAW7 530 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 UGT1A10Q9HAW8 530 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 UGT1A8Q9HAW9 530 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 IL26Q9NPH9 171 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 FAM8A1Q9UBU6 413 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 PKP3Q9Y446 797 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 PCDHA3Q9Y5H8 950 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 B3GALT1Q9Y5Z6 326 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 AHCTF1Q8WYP5 2266 aa10.32□□□□□ -0.76
CPSF4-212ENST00000482251 ZNF106Q9H2Y7 1883 aaKnown RBP10.32□□□□□ -0.76
CPSF4-212ENST00000482251 KIR2DS5A0A0G2JLQ3 304 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 A0A0G2JNG1 304 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 CCDC66A2RUB6 948 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 OR2AG2A6NM03 316 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 KIR2DS3K7RE56 304 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 GAPDHSO14556 408 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-212ENST00000482251 CHUKO15111 745 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 KMOO15229 486 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 EFSO43281 561 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 PRAMEF1O95521 474 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 PTMAP06454 111 aaKnown RBP10.31□□□□□ -0.76
CPSF4-212ENST00000482251 RBP3P10745 1247 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 PYGMP11217 842 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 TYRP1P17643 537 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 WT1P19544 449 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-212ENST00000482251 AKT1P31749 480 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 CTSCP53634 463 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 GEMP55040 296 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 COPS2P61201 443 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 UBE2IP63279 158 aaKnown RBP10.31□□□□□ -0.76
CPSF4-212ENST00000482251 RHDQ02161 417 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 XRCC4Q13426 336 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 SPARCL1Q14515 664 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 KIR2DS5Q14953 304 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 CLPPQ16740 277 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-212ENST00000482251 ANKRD20A2Q5SQ80 823 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 ANKRD20A1Q5TYW2 823 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 TMEM164Q5U3C3 297 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 ANKRD20A3Q5VUR7 823 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 ANKS6Q68DC2 871 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 ITPRIPL1Q6GPH6 555 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 DARS2Q6PI48 645 aaKnown RBP10.31□□□□□ -0.76
CPSF4-212ENST00000482251 TMEM139Q8IV31 216 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 TAB3Q8N5C8 712 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-212ENST00000482251 LRRC57Q8N9N7 239 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 TTC9Q92623 222 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 TTC25Q96NG3 672 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 VPS35Q96QK1 796 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 TRABDQ9H4I3 376 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 SLC39A1Q9NY26 324 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 IL17CQ9P0M4 197 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 ZNF624Q9P2J8 865 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-212ENST00000482251 FKBPLQ9UIM3 349 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 ACSL6Q9UKU0 697 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 TRHDEQ9UKU6 1024 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 SSUH2Q9Y2M2 353 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 KCTD3Q9Y597 815 aa10.31□□□□□ -0.76
CPSF4-212ENST00000482251 BTNL10A8MVZ5 291 aa10.3□□□□□ -0.76
CPSF4-212ENST00000482251 GPR89AB7ZAQ6 455 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms