RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 C19orf43Q9BQ61 176 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 LRRC40Q9H9A6 602 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 LOXL2Q9Y4K0 774 aa11.72□□□□□ -0.53
HMGN1-213ENST00000482192 CACNA1BQ00975 2339 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 SCN8AQ9UQD0 1980 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 PDZK1P1A8MUH7 402 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 GAPDHSO14556 408 aaPredicted RBP11.71□□□□□ -0.53
HMGN1-213ENST00000482192 GPR39O43194 453 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 PSMD3O43242 534 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 DUX1O43812 170 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 UGT1A9O60656 530 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 SRP72O76094 671 aaKnown RBP11.71□□□□□ -0.53
HMGN1-213ENST00000482192 METTL18O95568 372 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 JMJD7P0C870 316 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 UGT1A6P19224 532 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 UGT1A1P22309 533 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 UGT1A4P22310 534 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 UGT1A3P35503 534 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 UGT1A5P35504 534 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 HADHAP40939 763 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 CCDC173Q0VFZ6 552 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 MSLNQ13421 630 aaPredicted RBP11.71□□□□□ -0.53
HMGN1-213ENST00000482192 GPRC6AQ5T6X5 926 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 NKAIN2Q5VXU1 208 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 TMPRSS9Q7Z410 1059 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 CLEC14AQ86T13 490 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 RASGEF1AQ8N9B8 481 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 TRIM58Q8NG06 486 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 OR4D9Q8NGE8 314 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 ZNF398Q8TD17 642 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 KCNE4Q8WWG9 221 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 CCDC97Q96F63 343 aaPredicted RBP11.71□□□□□ -0.53
HMGN1-213ENST00000482192 AHCYL2Q96HN2 611 aaKnown RBP11.71□□□□□ -0.53
HMGN1-213ENST00000482192 NUDT22Q9BRQ3 303 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.71□□□□□ -0.53
HMGN1-213ENST00000482192 ZMYND15Q9H091 742 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 SEMA6CQ9H3T2 930 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 UGT1A7Q9HAW7 530 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 UGT1A10Q9HAW8 530 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 UGT1A8Q9HAW9 530 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 PRDM8Q9NQV8 689 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 AKAP7Q9P0M2 348 aaPredicted RBP11.71□□□□□ -0.53
HMGN1-213ENST00000482192 CPNE7Q9UBL6 633 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 SLC23A2Q9UGH3 650 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 FKBPLQ9UIM3 349 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 DNAJC16Q9Y2G8 782 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 PCDHGA7Q9Y5G6 932 aa11.71□□□□□ -0.53
HMGN1-213ENST00000482192 WDFY3Q8IZQ1 3526 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 IGHV5-10-1A0A0J9YXX1 117 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 PRR19A6NJB7 356 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 ERI2A8K979 691 aaKnown RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 HGSO14964 777 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 KCNJ13O60928 360 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 AP2A1O95782 977 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 HGFP14210 728 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 XRCC1P18887 633 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 IDSP22304 550 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 ITPKBP27987 946 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 AKT1P31749 480 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 CSF2RBP32927 897 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 PPM1FP49593 454 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 ZNF140P52738 457 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 LIMK2P53671 638 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 EPHA4P54764 986 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 TLE3Q04726 772 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 NFATC2Q13469 925 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 TRA2AQ13595 282 aaKnown RBP eCLIP11.7□□□□□ -0.548e-24■■□□□ 11.7
HMGN1-213ENST00000482192 OASLQ15646 514 aaKnown RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 LONRF2Q1L5Z9 754 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 AGAP9Q5VTM2 703 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 WASH2PQ6VEQ5 465 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 ZNF574Q6ZN55 896 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 C11orf96Q7Z7L8 435 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 LINC00523Q86TU6 105 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 PDZD3Q86UT5 571 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 AMZ2Q86W34 360 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 ZNF761Q86XN6 746 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 SPACA3Q8IXA5 215 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 ZNF514Q96K75 400 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 CCDC74BQ96LY2 380 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 EPB41L1Q9H4G0 881 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 ASB8Q9H765 288 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 GRPEL1Q9HAV7 217 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 WASH6PQ9NQA3 447 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 PISDQ9UG56 409 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 ZNF148Q9UQR1 794 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 PPP2R2CQ9Y2T4 447 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 KCTD3Q9Y597 815 aa11.7□□□□□ -0.54
HMGN1-213ENST00000482192 GOLGA4Q13439 2230 aaKnown RBP11.7□□□□□ -0.54
HMGN1-213ENST00000482192 OR2AG2A6NM03 316 aa11.69□□□□□ -0.54
HMGN1-213ENST00000482192 AGAP14A8MT82 685 aa11.69□□□□□ -0.54
HMGN1-213ENST00000482192 LDB2O43679 373 aa11.69□□□□□ -0.54
HMGN1-213ENST00000482192 IFNB1P01574 187 aa11.69□□□□□ -0.54
HMGN1-213ENST00000482192 THRAP10827 490 aa11.69□□□□□ -0.54
HMGN1-213ENST00000482192 HOXB3P14651 431 aaPredicted RBP11.69□□□□□ -0.54
HMGN1-213ENST00000482192 MSH3P20585 1137 aa11.69□□□□□ -0.54
HMGN1-213ENST00000482192 ITGALP20701 1170 aa11.69□□□□□ -0.54
HMGN1-213ENST00000482192 CTSCP53634 463 aa11.69□□□□□ -0.54
HMGN1-213ENST00000482192 UBE2IP63279 158 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms