RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SLC35F3Q8IY50 421 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 FSTL5Q8N475 847 aaPredicted RBP10.46□□□□□ -0.73
SSBP1-210ENST00000481508 DNAAF3Q8N9W5 541 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 KYQ8NBH2 561 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 GPBAR1Q8TDU6 330 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 HNRNPLLQ8WVV9 542 aaKnown RBP10.46□□□□□ -0.73
SSBP1-210ENST00000481508 SLCO2A1Q92959 643 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 VPS35Q96QK1 796 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 OR2M4Q96R27 311 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 CDH19Q9H159 772 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 RAD18Q9NS91 495 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 SPATS2LQ9NUQ6 558 aaKnown RBP10.46□□□□□ -0.73
SSBP1-210ENST00000481508 NLE1Q9NVX2 485 aaPredicted RBP10.46□□□□□ -0.73
SSBP1-210ENST00000481508 SYBUQ9NX95 663 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 SLC23A2Q9UGH3 650 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 FEZ2Q9UHY8 353 aaPredicted RBP10.46□□□□□ -0.73
SSBP1-210ENST00000481508 MSRB2Q9Y3D2 182 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 PKP3Q9Y446 797 aa10.46□□□□□ -0.73
SSBP1-210ENST00000481508 TEX15Q9BXT5 2789 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 CCDC162PA2VCL2 907 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 GOLGA8MH3BSY2 632 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 TNFSF14O43557 240 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 NUAK1O60285 661 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 DKK1O94907 266 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 SLC25A14O95258 325 aaPredicted RBP10.45□□□□□ -0.74
SSBP1-210ENST00000481508 ANXA6P08133 673 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 CTSEP14091 401 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 IVDP26440 423 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 MC4RP32245 332 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 BLKP51451 505 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 CTSCP53634 463 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 B4GALNT1Q00973 533 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 SMAD1Q15797 465 aaKnown RBP10.45□□□□□ -0.74
SSBP1-210ENST00000481508 INAVAQ3KP66 663 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 CCDC157Q569K6 752 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 PERM1Q5SV97 790 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 GPRC6AQ5T6X5 926 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 TSTD2Q5T7W7 516 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 RNASEH2BQ5TBB1 312 aaKnown RBP10.45□□□□□ -0.74
SSBP1-210ENST00000481508 PDPK2PQ6A1A2 396 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 GUSBP11Q6P575 273 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 SLC30A9Q6PML9 568 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 XKR5Q6UX68 686 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 C4orf22Q6V702 233 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 TAF8Q7Z7C8 310 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 CAND1Q86VP6 1230 aaKnown RBP10.45□□□□□ -0.74
SSBP1-210ENST00000481508 JAMLQ86YT9 394 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 PHYKPLQ8IUZ5 450 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 PIANPQ8IYJ0 282 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 RASGEF1AQ8N9B8 481 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 NAT8LQ8N9F0 302 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 ZNF398Q8TD17 642 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 DTX3LQ8TDB6 740 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 PATE1Q8WXA2 126 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 CDKN2AIPNLQ96HQ2 116 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 RANBP9Q96S59 729 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 CDC6Q99741 560 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 BOCQ9BWV1 1114 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 TRIM39Q9HCM9 518 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 CHRAC1Q9NRG0 131 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 SMOXQ9NWM0 555 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 TAAR2Q9P1P5 351 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 VPS18Q9P253 973 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 PCYOX1Q9UHG3 505 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 KCNK6Q9Y257 313 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 TCAF1Q9Y4C2 921 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 COL6A6A6NMZ7 2263 aa10.45□□□□□ -0.74
SSBP1-210ENST00000481508 MGAQ8IWI9 3026 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 NEMP2A6NFY4 417 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 AGAP14A8MT82 685 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 B4DGG1 531 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 H7C0S8 307 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 TPP1O14773 563 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 CHUKO15111 745 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 TP73O15350 636 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 TTI1O43156 1089 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 GRID2O43424 1007 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 SGTAO43765 313 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 NOBOXO60393 691 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 ACP5P13686 325 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 NMBRP28336 390 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 FOXN2P32314 431 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 MAZP56270 477 aaKnown RBP10.44□□□□□ -0.74
SSBP1-210ENST00000481508 NFATC2Q13469 925 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 SEMA3AQ14563 771 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 ELOCQ15369 112 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 PPP1R7Q15435 360 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 KIF26BQ2KJY2 2108 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 HS1BP3Q53T59 392 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 ZRANB3Q5FWF4 1079 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 ZCCHC8Q6NZY4 707 aaKnown RBP10.44□□□□□ -0.74
SSBP1-210ENST00000481508 LRRC8BQ6P9F7 803 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 CES3Q6UWW8 571 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 DET1Q7L5Y6 550 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 CHST15Q7LFX5 561 aaPredicted RBP10.44□□□□□ -0.74
SSBP1-210ENST00000481508 C11orf96Q7Z7L8 435 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 GALNT13Q8IUC8 556 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 FAM181AQ8N9Y4 354 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 DDHD1Q8NEL9 900 aa10.44□□□□□ -0.74
SSBP1-210ENST00000481508 GRK7Q8WTQ7 553 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms