RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 LHCGRP22888 699 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 VIPR1P32241 457 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 DGKQP52824 942 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 FOXL2P58012 376 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 GPR18Q14330 331 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 INAQ16352 499 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 CYP2A13Q16696 494 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 CES4AQ5XG92 561 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 RFLNAQ6ZTI6 216 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 RRAGAQ7L523 313 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 PHYKPLQ8IUZ5 450 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 CA5BP1Q8WTZ4 195 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 SNX21Q969T3 373 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 ACP6Q9NPH0 428 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 ZNF358Q9NW07 568 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 ABI3Q9P2A4 366 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 CD84Q9UIB8 345 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 SIK3Q9Y2K2 1263 aa11.62□□□□□ -0.55
USP11-208ENST00000480104 PTRH2Q9Y3E5 179 aaKnown RBP11.62□□□□□ -0.55
USP11-208ENST00000480104 DOCK10Q96BY6 2186 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 PCM1Q15154 2024 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 FAM72CH0Y354 149 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 DDX3YO15523 660 aaKnown RBP11.61□□□□□ -0.55
USP11-208ENST00000480104 MED7O43513 233 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 CUTAO60888 179 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 LCA5LO95447 670 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 ATP1A1P05023 1023 aaKnown RBP11.61□□□□□ -0.55
USP11-208ENST00000480104 KRT5P13647 590 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 XRCC1P18887 633 aaPredicted RBP11.61□□□□□ -0.55
USP11-208ENST00000480104 FOLR3P41439 243 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 POLR2LP62875 67 aaKnown RBP11.61□□□□□ -0.55
USP11-208ENST00000480104 HSD11B2P80365 405 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 PPP2R2BQ00005 443 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 SLC6A3Q01959 620 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 DPTQ07507 201 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 BCL2L1Q07817 233 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 MYBPHQ13203 477 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 ZCWPW2Q504Y3 356 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 FAM72AQ5TYM5 149 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 PRAMEF13Q5VWM6 474 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 FAM72DQ6L9T8 149 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 SHC4Q6S5L8 630 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 LINC00696Q6ZRV3 163 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 TECPR1Q7Z6L1 1165 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 SRLQ86TD4 932 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 FAM72BQ86X60 149 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 KMT5CQ86Y97 462 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 DMRTC2Q8IXT2 367 aaPredicted RBP11.61□□□□□ -0.55
USP11-208ENST00000480104 WDTC1Q8N5D0 677 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 ZNF397Q8NF99 534 aaPredicted RBP11.61□□□□□ -0.55
USP11-208ENST00000480104 ZNF606Q8WXB4 792 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 SDCCAG3Q96C92 435 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 COX14Q96I36 57 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 MAGED4Q96JG8 741 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 DHRS4Q9BTZ2 278 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 RAB33BQ9H082 229 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 OSGEPL1Q9H4B0 414 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 ZNF395Q9H8N7 513 aaPredicted RBP11.61□□□□□ -0.55
USP11-208ENST00000480104 ACTR5Q9H9F9 607 aaPredicted RBP11.61□□□□□ -0.55
USP11-208ENST00000480104 METTL14Q9HCE5 456 aaKnown RBP11.61□□□□□ -0.55
USP11-208ENST00000480104 UBA2Q9UBT2 640 aaPredicted RBP11.61□□□□□ -0.55
USP11-208ENST00000480104 OR12D3Q9UGF7 316 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 KCNN3Q9UGI6 736 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 FBXL4Q9UKA2 621 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 SMC3Q9UQE7 1217 aa11.61□□□□□ -0.55
USP11-208ENST00000480104 TRAFD1O14545 582 aaPredicted RBP11.6□□□□□ -0.55
USP11-208ENST00000480104 WISP2O76076 250 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 SPAM1P38567 509 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 PLA2G4EQ3MJ16 856 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 SLC25A52Q3SY17 297 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 ZFYVE27Q5T4F4 411 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 IRAK1BP1Q5VVH5 260 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 PASD1Q8IV76 773 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 TMEM151BQ8IW70 566 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 ARHGEF19Q8IW93 802 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 DNAAF3Q8N9W5 541 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 SCAMP4Q969E2 229 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 MBD6Q96DN6 1003 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 AGAP2Q99490 1192 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 SLC6A20Q9NP91 592 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 VPS18Q9P253 973 aa11.6□□□□□ -0.55
USP11-208ENST00000480104 NOTCH1P46531 2555 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 NPIPB15A6NHN6 443 aaPredicted RBP11.59□□□□□ -0.55
USP11-208ENST00000480104 AGPSO00116 658 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 LRIG2O94898 1065 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 ATXN8OSP0DMR3 200 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 NRG1Q02297 640 aaPredicted RBP11.59□□□□□ -0.55
USP11-208ENST00000480104 DMPKQ09013 629 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 PLCL1Q15111 1095 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 PTPRRQ15256 657 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 PTPN20Q4JDL3 420 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 DNTTIP2Q5QJE6 756 aaKnown RBP11.59□□□□□ -0.55
USP11-208ENST00000480104 MLIPQ5VWP3 458 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 TSPAN33Q86UF1 283 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 TSEN2Q8NCE0 465 aaKnown RBP11.59□□□□□ -0.55
USP11-208ENST00000480104 AP2M1Q96CW1 435 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 TBC1D31Q96DN5 1066 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 RMND5BQ96G75 393 aaPredicted RBP11.59□□□□□ -0.55
USP11-208ENST00000480104 TMX3Q96JJ7 454 aa11.59□□□□□ -0.55
USP11-208ENST00000480104 NSMCE3Q96MG7 304 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms