RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	LDLR	P01130	860 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	FGG	P02679	453 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	ATP1A1	P05023	1023 aa	Known RBP	15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	GBE1	Q04446	702 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	PPID	Q08752	370 aa	Known RBP	15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	ILF3	Q12906	894 aa	Known RBP eCLIP	15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	KRTAP21-3	Q3LHN1	58 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	RALGPS1	Q5JS13	557 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	MARC1	Q5VT66	337 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	NKAIN2	Q5VXU1	208 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	ERAP2	Q6P179	960 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	NRROS	Q86YC3	692 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	PLA2G15	Q8NCC3	412 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	ACTRT1	Q8TDG2	376 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	PPP1R2P1	Q96PQ5	205 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	WDR24	Q96S15	920 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	SLC29A3	Q9BZD2	475 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	PCDH12	Q9NPG4	1184 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	TRNAU1AP	Q9NX07	287 aa	Known RBP	15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	TMEM9	Q9P0T7	183 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	TAAR2	Q9P1P5	351 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	RPS6KL1	Q9Y6S9	549 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	DIDO1	Q9BTC0	2240 aa	Known RBP	15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894	ZFHX3	Q15911	3703 aa		15.44	■□□□□ 0.06
HDLBP-238	ENST00000479894		H7C0C1	242 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	INPP4B	O15327	924 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	MAFK	O60675	156 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	TMCC1	O94876	653 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	PDGFA	P04085	211 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	MPST	P25325	297 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	VARS	P26640	1264 aa	Known RBP	15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	STIP1	P31948	543 aa	Known RBP	15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	MMP12	P39900	470 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	ATP5O	P48047	213 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	NSUN2	Q08J23	767 aa	Known RBP eCLIP	15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	AP1B1	Q10567	949 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	ZNF235	Q14590	738 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	NOMO1	Q15155	1222 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	EIF2S3L	Q2VIR3	472 aa	Known RBP	15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	ARHGAP22	Q7Z5H3	698 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	NAGS	Q8N159	534 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	RASGEF1C	Q8N431	466 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	OLFM3	Q96PB7	478 aa		15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	CINP	Q9BW66	212 aa	Predicted RBP	15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	MRPS18B	Q9Y676	258 aa	Known RBP	15.43	■□□□□ 0.06
HDLBP-238	ENST00000479894	MED13L	Q71F56	2210 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	PPM1D	O15297	605 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	F8A1	P23610	371 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	CXCR5	P32302	372 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	CSNK1D	P48730	415 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	EIF3E	P60228	445 aa	Known RBP	15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	RHOA	P61586	193 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	KLF1	Q13351	362 aa	Predicted RBP	15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	LBR	Q14739	615 aa	Known RBP	15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	CCNG2	Q16589	344 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	DRICH1	Q6PGQ1	229 aa	Predicted RBP	15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	DARS2	Q6PI48	645 aa	Known RBP	15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	BRAT1	Q6PJG6	821 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	SYT10	Q6XYQ8	523 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	KIF18A	Q8NI77	898 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	ACTL9	Q8TC94	416 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	LRRC45	Q96CN5	670 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	C16orf45	Q96MC5	204 aa	Predicted RBP	15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	PSKH2	Q96QS6	385 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	CTRC	Q99895	268 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	WDR26	Q9H7D7	661 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	PDF	Q9HBH1	243 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	MOSPD1	Q9UJG1	213 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	TRHDE	Q9UKU6	1024 aa		15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	OAS3	Q9Y6K5	1087 aa	Known RBP	15.42	■□□□□ 0.06
HDLBP-238	ENST00000479894	TCP11X1	B4DZS4	312 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894		J3KR12	359 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	RECQL5	O94762	991 aa	Predicted RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	FURIN	P09958	794 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	RBP3	P10745	1247 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	CA4	P22748	312 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	DEK	P35659	375 aa	Known RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	DLST	P36957	453 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	MMP13	P45452	471 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	IFI35	P80217	286 aa	Predicted RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	OTUD4	Q01804	1114 aa	Known RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	SLC10A2	Q12908	348 aa	Predicted RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	ERV3-1	Q14264	604 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	PRKD1	Q15139	912 aa	Predicted RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	WDR74	Q6RFH5	385 aa	Predicted RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	C4orf22	Q6V702	233 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	C17orf53	Q8N3J3	647 aa	Predicted RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	PRR7	Q8TB68	274 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	MAML1	Q92585	1016 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	RUNDC3B	Q96NL0	473 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	QKI	Q96PU8	341 aa	Known RBP eCLIP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	LGR4	Q9BXB1	951 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	SUV39H2	Q9H5I1	410 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	CARS2	Q9HA77	564 aa	Known RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	ERRFI1	Q9UJM3	462 aa	Predicted RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	KCND3	Q9UK17	655 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	ATP8A1	Q9Y2Q0	1164 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	PCDHGA9	Q9Y5G4	932 aa	Known RBP	15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	ADGRG4	Q8IZF6	3080 aa		15.41	■□□□□ 0.06
HDLBP-238	ENST00000479894	CELSR1	Q9NYQ6	3014 aa		15.41	■□□□□ 0.06

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