RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ZNF7P17097 686 aaPredicted RBP17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 RBL1P28749 1068 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 ATP5OP48047 213 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 SEPHS1P49903 392 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 DCDC1P59894 354 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 UBE2IP63279 158 aaKnown RBP17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 TRA2AQ13595 282 aaKnown RBP eCLIP17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 TCEAL1Q15170 157 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 CHRNA6Q15825 494 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 DAAM2Q86T65 1068 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 LRRTM4Q86VH4 590 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 TRAPPC5Q8IUR0 188 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 IL22RA1Q8N6P7 574 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 BMPERQ8N8U9 685 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 QKIQ96PU8 341 aaKnown RBP eCLIP17.13■□□□□ 0.333e-7■■■■□ 24.7
ECHDC1-216ENST00000479525 ARHGAP9Q9BRR9 750 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 TRIM4Q9C037 500 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 STN1Q9H668 368 aaKnown RBP17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 RMI1Q9H9A7 625 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 WDR37Q9Y2I8 494 aa17.13■□□□□ 0.33
ECHDC1-216ENST00000479525 TENM4Q6N022 2769 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 CHUKO15111 745 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 ZRANB2O95218 330 aaKnown RBP eCLIP17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 AGTP01019 485 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 LEPRP48357 1165 aaKnown RBP17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 CTSCP53634 463 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 PPP1CAP62136 330 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 DET1Q7L5Y6 550 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 GLT6D1Q7Z4J2 308 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 ARHGAP22Q7Z5H3 698 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 TRIM48Q8IWZ4 208 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 KATNAL2Q8IYT4 538 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 ACRBPQ8NEB7 543 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 RSC1A1Q92681 617 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 ELMO2Q96JJ3 720 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 TGM7Q96PF1 710 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 FICDQ9BVA6 458 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 RSPH14Q9UHP6 348 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 PSMD13Q9UNM6 376 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 KCTD3Q9Y597 815 aa17.12■□□□□ 0.33
ECHDC1-216ENST00000479525 HELZ2Q9BYK8 2649 aaKnown RBP17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 A0A0U1RQJ8 604 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 LOC285095A0A1B0GVY8 99 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 OR2AG2A6NM03 316 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 KMOO15229 486 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 KIF1CO43896 1103 aaKnown RBP17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 RAD1O60671 282 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 VIPP01282 170 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 NR2C2P49116 596 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 TMEM115Q12893 351 aaPredicted RBP17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 SQSTM1Q13501 440 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 CLCA4Q14CN2 919 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 SLC1A5Q15758 541 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 TBR1Q16650 682 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 CCDC181Q5TID7 509 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 SARM1Q6SZW1 724 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 FAM83HQ6ZRV2 1179 aaPredicted RBP17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 TIPARPQ7Z3E1 657 aaKnown RBP17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 PRICKLE2Q7Z3G6 844 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 C11orf96Q7Z7L8 435 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 RAVER1Q8IY67 606 aaKnown RBP17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 CACNA2D3Q8IZS8 1091 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 BEND7Q8N7W2 519 aaPredicted RBP17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 GPR150Q8NGU9 434 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 RTP4Q96DX8 246 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 MED8Q96G25 268 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 RBSNQ9H1K0 784 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 IL26Q9NPH9 171 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 REXO2Q9Y3B8 237 aaKnown RBP17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 ARL5AQ9Y689 179 aa17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 CFAP20Q9Y6A4 193 aaKnown RBP17.11■□□□□ 0.33
ECHDC1-216ENST00000479525 KIR2DS5A0A0G2JLQ3 304 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 A0A0G2JNG1 304 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 KIR2DS3K7RE56 304 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 GAPDHSO14556 408 aaPredicted RBP17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 SPAM1P38567 509 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 HADHBP55084 474 aaKnown RBP17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 NAP1L1P55209 391 aaKnown RBP17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 SH3BP2P78314 561 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 OTUD4Q01804 1114 aaKnown RBP17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 KIR2DS5Q14953 304 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 SPA17Q15506 151 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 PPP2R5EQ16537 467 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 CLPPQ16740 277 aaPredicted RBP17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 DCAF12Q5T6F0 453 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 RAD9BQ6WBX8 426 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 TMEM26Q6ZUK4 368 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 RCOR2Q8IZ40 523 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 RASGEF1AQ8N9B8 481 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 WBP1Q96G27 269 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 FCRL5Q96RD9 977 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 IL17CQ9P0M4 197 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 PDP2Q9P2J9 529 aa17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 NFKBIL1Q9UBC1 381 aaPredicted RBP17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 MRPS18BQ9Y676 258 aaKnown RBP17.1■□□□□ 0.33
ECHDC1-216ENST00000479525 LOC101059948A0A1B0GTJ6 334 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 CCL22O00626 93 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 UBXN7O94888 489 aa17.09■□□□□ 0.33
ECHDC1-216ENST00000479525 LCA5LO95447 670 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms