RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ILVBLA1L0T0 632 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 H7C0S8 307 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 FCGRTP55899 365 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 UGT3A1Q6NUS8 523 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 ZNF786Q8N393 782 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 DNAJB14Q8TBM8 379 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 LINC01599Q8WXQ3 324 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 VPS33AQ96AX1 596 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 LRRC3Q9BY71 257 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 SMPD3Q9NY59 655 aaPredicted RBP24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 NUDT4Q9NZJ9 180 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 C9JVG2 144 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 BAIAP3O94812 1187 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 LDLRP01130 860 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 NELFEP18615 380 aaKnown RBP24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 SLC6A4P31645 630 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 CAPGP40121 348 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 KCNQ1P51787 676 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 NUP107P57740 925 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 UFM1P61960 85 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 ECT2LQ008S8 904 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 PRKG2Q13237 762 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 PAGE3Q5JUK9 113 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 ABRAXAS1Q6UWZ7 409 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 PATL1Q86TB9 770 aaKnown RBP24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 ZFAND4Q86XD8 727 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 HID1Q8IV36 788 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 KIAA2013Q8IYS2 634 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 CFAP52Q8N1V2 620 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 GRIN3AQ8TCU5 1115 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 GAB3Q8WWW8 586 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 PDLIM5Q96HC4 596 aaKnown RBP24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 TEX37Q96LM6 180 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 SEPT5Q99719 369 aaPredicted RBP24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 SLC27A5Q9Y2P5 690 aa24.38■■□□□ 1.49
SYNGAP1-206ENST00000479510 E2F3O00716 465 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 ESR1P03372 595 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 AGTR2P50052 363 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 SCNN1BP51168 640 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 ATP6AP1LQ52LC2 224 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 RABL3Q5HYI8 236 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 C6orf136Q5SQH8 315 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 NANOGP8Q6NSW7 305 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 CHST9Q7L1S5 443 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 STK40Q8N2I9 435 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 DHRSXQ8N5I4 330 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 TERB1Q8NA31 727 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 CD200R1Q8TD46 325 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 NANOGQ9H9S0 305 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 MAGEL2Q9UJ55 1249 aa24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 AGO1Q9UL18 857 aaKnown RBP24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 TNPO3Q9Y5L0 923 aaKnown RBP24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 ZFP37Q9Y6Q3 630 aaPredicted RBP24.37■■□□□ 1.49
SYNGAP1-206ENST00000479510 FAM149AA5PLN7 773 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 ARNTLO00327 626 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 CLOCKO15516 846 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 GNAO1P09471 354 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 CKBP12277 381 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 UGT1A6P19224 532 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 PRDX3P30048 256 aaKnown RBP24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 ATP5C1P36542 298 aaKnown RBP24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 PTGER3P43115 390 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 RGRP47804 291 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 CRHR2Q13324 411 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 CTSL3PQ5NE16 218 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 ISG20Q96AZ6 181 aaKnown RBP24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 LINGO1Q96FE5 620 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 PLEKHG4BQ96PX9 1271 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 SPON2Q9BUD6 331 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 TMEM161AQ9NX61 479 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 CD274Q9NZQ7 290 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 PCDHB3Q9Y5E6 796 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 GOLGA8CPA6NN73 597 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 TBC1D4O60343 1298 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 TPST1O60507 370 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 C1RP00736 705 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 MC4RP32245 332 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 OR2T11Q8NH01 316 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 NSMCE3Q96MG7 304 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 BDH2Q9BUT1 245 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 GALPQ9UBC7 116 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 FADS3Q9Y5Q0 445 aa24.36■■□□□ 1.49
SYNGAP1-206ENST00000479510 VWA8A3KMH1 1905 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 GREB1Q4ZG55 1949 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 H0YAE9 185 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 H7C4K7 107 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 SYNCRIPO60506 623 aaKnown RBP24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 TULP3O75386 442 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 VNN2O95498 520 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 RPS9P46781 194 aaKnown RBP24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 HK3P52790 923 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 YBX1P67809 324 aaKnown RBP24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 PCBP2Q15366 365 aaKnown RBP eCLIP24.35■■□□□ 1.499e-7■■■■□ 24.1
SYNGAP1-206ENST00000479510 TRAF7Q6Q0C0 670 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 PIANPQ8IYJ0 282 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 AADATQ8N5Z0 425 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 ZNF420Q8TAQ5 688 aaPredicted RBP24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 RAI2Q9Y5P3 530 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 ST14Q9Y5Y6 855 aa24.35■■□□□ 1.49
SYNGAP1-206ENST00000479510 SLC38A8A6NNN8 435 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms