RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 AKAP7Q9P0M2 348 aaPredicted RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 CPSF2Q9P2I0 782 aaKnown RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 B4GALT6Q9UBX8 382 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 PLEKHB1Q9UF11 243 aaPredicted RBP6.61□□□□□ -1.35
VCP-205ENST00000479300 PILRAQ9UKJ1 303 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 FBN2P35556 2912 aa6.61□□□□□ -1.35
VCP-205ENST00000479300 DOPEY1Q5JWR5 2465 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 OTOGQ6ZRI0 2925 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 CSMD1Q96PZ7 3565 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 PRR19A6NJB7 356 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 RHPN2P1A8MT19 583 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 CFAP99D6REC4 459 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 PSMD11O00231 422 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 TNFRSF10CO14798 259 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 HGSO14964 777 aaPredicted RBP6.6□□□□□ -1.35
VCP-205ENST00000479300 PPM1DO15297 605 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 RAD1O60671 282 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 MAFKO60675 156 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 PROSCO94903 275 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 ZFXP17010 805 aaPredicted RBP6.6□□□□□ -1.35
VCP-205ENST00000479300 F8A1P23610 371 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 CCNCP24863 283 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 AK4P27144 223 aaPredicted RBP6.6□□□□□ -1.35
VCP-205ENST00000479300 IL1R2P27930 398 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 TNFRSF8P28908 595 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 ALDH4A1P30038 563 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 GCKP35557 465 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 GPR1P46091 355 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 LIMK2P53671 638 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 MLLT10P55197 1068 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 CDC20Q12834 499 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 ILF3Q12906 894 aaKnown RBP eCLIP6.6□□□□□ -1.35
VCP-205ENST00000479300 MESDQ14696 234 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 ANKS6Q68DC2 871 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 TTC19Q6DKK2 380 aaPredicted RBP6.6□□□□□ -1.35
VCP-205ENST00000479300 RAET1GQ6H3X3 334 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 PNCKQ6P2M8 343 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 ZNF662Q6ZS27 426 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 PIM3Q86V86 326 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 TMTC1Q8IUR5 882 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 CNGA4Q8IV77 575 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 CCDC13Q8IYE1 715 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 CACNA2D3Q8IZS8 1091 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 IL22RA1Q8N6P7 574 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 CCHCR1Q8TD31 782 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 GPBAR1Q8TDU6 330 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 AENQ8WTP8 325 aaKnown RBP6.6□□□□□ -1.35
VCP-205ENST00000479300 RNF31Q96EP0 1072 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 MGME1Q9BQP7 344 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 ZNF670Q9BS34 389 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 GSDMCQ9BYG8 508 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 CARS2Q9HA77 564 aaKnown RBP6.6□□□□□ -1.35
VCP-205ENST00000479300 NOD2Q9HC29 1040 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 LUC7LQ9NQ29 371 aaKnown RBP6.6□□□□□ -1.35
VCP-205ENST00000479300 RBM22Q9NW64 420 aaKnown RBP eCLIP6.6□□□□□ -1.35
VCP-205ENST00000479300 AMACRQ9UHK6 382 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 TP53TG5Q9Y2B4 290 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 VPS9D1Q9Y2B5 631 aa6.6□□□□□ -1.35
VCP-205ENST00000479300 IGHV1OR21-1A0A087WYE8 117 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 PRSS38A1L453 326 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 TTC24A2A3L6 582 aaPredicted RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 ZNF891A8MT65 544 aaPredicted RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 TRAFD1O14545 582 aaPredicted RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 MATN3O15232 486 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 HTRA2O43464 458 aaPredicted RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 AHCYL1O43865 530 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 MFAP3LO75121 409 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 SEMA7AO75326 666 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 HEXIM1O94992 359 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 PGLSO95336 258 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 ASMTLO95671 621 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 ECEL1O95672 775 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 PDGFAP04085 211 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 GYPCP04921 128 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 FURINP09958 794 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 TMEM253P0C7T8 217 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 MYBL2P10244 700 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 THRAP10827 490 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 MYCLP1P12525 358 aaPredicted RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 CCNB1P14635 433 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 PECAM1P16284 738 aaPredicted RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 ZNF30P17039 623 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 CTPS1P17812 591 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 MAN1A1P33908 653 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 TRIM23P36406 574 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 PBX1P40424 430 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 GARSP41250 739 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 ATP1A2P50993 1020 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 RPS6KA3P51812 740 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 MAXP61244 160 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 SLC25A11Q02978 314 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 GALNT2Q10471 571 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 TRAF2Q12933 501 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 MMRN1Q13201 1228 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 XRCC4Q13426 336 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 DPYSL3Q14195 570 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 PAFAH1B3Q15102 231 aaKnown RBP6.59□□□□□ -1.35
VCP-205ENST00000479300 CNGA3Q16281 694 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 SLC18A3Q16572 532 aa6.59□□□□□ -1.35
VCP-205ENST00000479300 DEFB109BQ30KR1 87 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms