RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 GLB1P16278 677 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 MGAT1P26572 445 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 CLCNKAP51800 687 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 SHC2P98077 582 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 KCTD19Q17RG1 926 aaPredicted RBP20.2■□□□□ 0.82
VARS-224ENST00000479051 PLA2G4EQ3MJ16 856 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 PPIL6Q8IXY8 311 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 RASGEF1AQ8N9B8 481 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 WDR48Q8TAF3 677 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 MAPK15Q8TD08 544 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 OSGEPL1Q9H4B0 414 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 FAM96AQ9H5X1 160 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 STN1Q9H668 368 aaKnown RBP20.2■□□□□ 0.82
VARS-224ENST00000479051 ZDHHC3Q9NYG2 299 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 SAMD15Q9P1V8 674 aa20.2■□□□□ 0.82
VARS-224ENST00000479051 PCYT1BQ9Y5K3 369 aaPredicted RBP20.2■□□□□ 0.82
VARS-224ENST00000479051 DNMT3AQ9Y6K1 912 aaPredicted RBP20.2■□□□□ 0.82
VARS-224ENST00000479051 CCDC162PA2VCL2 907 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 ZW10O43264 779 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 NUDT21O43809 227 aaKnown RBP20.19■□□□□ 0.82
VARS-224ENST00000479051 ACRV1P26436 265 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 PPARGP37231 505 aaPredicted RBP20.19■□□□□ 0.82
VARS-224ENST00000479051 ACVR1Q04771 509 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 DHX34Q14147 1143 aaKnown RBP20.19■□□□□ 0.82
VARS-224ENST00000479051 SMAD1Q15797 465 aaKnown RBP20.19■□□□□ 0.82
VARS-224ENST00000479051 LYPLAL1Q5VWZ2 237 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 ANKRD22Q5VYY1 191 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 CASC4Q6P4E1 433 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 TMEM220Q6QAJ8 160 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 ZNF534Q76KX8 674 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 SERPINA9Q86WD7 417 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 TMPRSS12Q86WS5 348 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 OR13J1Q8NGT2 312 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 OR6P1Q8NGX9 317 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 HDAC10Q969S8 669 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 CCDC3Q9BQI4 270 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 SCNM1Q9BWG6 230 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 MRM3Q9HC36 420 aaKnown RBP20.19■□□□□ 0.82
VARS-224ENST00000479051 NEUROG3Q9Y4Z2 214 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 ST14Q9Y5Y6 855 aa20.19■□□□□ 0.82
VARS-224ENST00000479051 TRBV5-4A0A0C4DH59 114 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 KLHL33A6NCF5 533 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 OR2AG2A6NM03 316 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 OR5K4A6NMS3 321 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 RHPN2P1A8MT19 583 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 KIF2AO00139 706 aaPredicted RBP20.18■□□□□ 0.82
VARS-224ENST00000479051 OPA1O60313 960 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 SNX2O60749 519 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 TMEM63AO94886 807 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 PNLIPP16233 465 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 PTGIRP43119 386 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 ARSDP51689 593 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 CRADDP78560 199 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 HLTFQ14527 1009 aaKnown RBP eCLIP20.18■□□□□ 0.82
VARS-224ENST00000479051 FNBP1LQ5T0N5 605 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 DET1Q7L5Y6 550 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 TMPRSS7Q7RTY8 843 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 AMZ2Q86W34 360 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 JAMLQ86YT9 394 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 ZNF547Q8IVP9 402 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 AVL9Q8NBF6 648 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 CCDC74AQ96AQ1 378 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 KRT12Q99456 494 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 CHRAC1Q9NRG0 131 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 SYBUQ9NX95 663 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 SLC2A6Q9UGQ3 507 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 ANAPC5Q9UJX4 755 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 DNAJC16Q9Y2G8 782 aa20.18■□□□□ 0.82
VARS-224ENST00000479051 SDR42E2A6NKP2 422 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 GOLGA8MH3BSY2 632 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 DNALI1O14645 258 aaPredicted RBP20.17■□□□□ 0.82
VARS-224ENST00000479051 POP7O75817 140 aaKnown RBP20.17■□□□□ 0.82
VARS-224ENST00000479051 GOT2P00505 430 aaKnown RBP20.17■□□□□ 0.82
VARS-224ENST00000479051 F3P13726 295 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 ATP1B2P14415 290 aaPredicted RBP20.17■□□□□ 0.82
VARS-224ENST00000479051 JUPP14923 745 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 PAMP19021 973 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 IDSP22304 550 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 CA5AP35218 305 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 CTSCP53634 463 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 MAZP56270 477 aaKnown RBP20.17■□□□□ 0.82
VARS-224ENST00000479051 INSM1Q01101 510 aaPredicted RBP20.17■□□□□ 0.82
VARS-224ENST00000479051 CKAP4Q07065 602 aaKnown RBP20.17■□□□□ 0.82
VARS-224ENST00000479051 ITIH4Q14624 930 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 FASTKD1Q53R41 847 aaKnown RBP20.17■□□□□ 0.82
VARS-224ENST00000479051 AARS2Q5JTZ9 985 aaKnown RBP20.17■□□□□ 0.82
VARS-224ENST00000479051 PERM1Q5SV97 790 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 HES3Q5TGS1 186 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 CERS6Q6ZMG9 384 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 HOOK3Q86VS8 718 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 C17orf82Q86X59 251 aaPredicted RBP20.17■□□□□ 0.82
VARS-224ENST00000479051 NAGSQ8N159 534 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 ARL14Q8N4G2 192 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 NAT8LQ8N9F0 302 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 SPATA4Q8NEY3 305 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 OR4L1Q8NH43 312 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 ZNF778Q96MU6 729 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 SERPINB12Q96P63 405 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 KIFC1Q9BW19 673 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 VPS37BQ9H9H4 285 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms