RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 TMPPEQ6ZT21 453 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 MROH2BQ7Z745 1585 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 OR5J2Q8NH18 312 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 ZNF420Q8TAQ5 688 aaPredicted RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 ELP5Q8TE02 316 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 FBXO32Q969P5 355 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 COA1Q9GZY4 146 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 EPB41L4AQ9HCS5 686 aaPredicted RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 ACSS1Q9NUB1 689 aaPredicted RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 LYARQ9NX58 379 aaKnown RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 SCP2D1Q9UJQ7 156 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 PIN4Q9Y237 131 aaKnown RBP5.4□□□□□ -1.55
USF3-202ENST00000478658 NDUFAF1Q9Y375 327 aa5.4□□□□□ -1.55
USF3-202ENST00000478658 E2F8A0AVK6 867 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 NCBP2LA6PVI3 153 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 H7C417 338 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 MUSKO15146 869 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PLOD3O60568 738 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 RHOCP08134 193 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 UBCP0CG48 685 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 S100A3P33764 101 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 GRM5P41594 1212 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 GRK6P43250 576 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ALDH3B2P48448 385 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 NDST2P52849 883 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 BCAT1P54687 386 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 GYS2P54840 703 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 LRP8Q14114 963 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 TTMPQ5BVD1 217 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SGO1Q5FBB7 561 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 FBXL19Q6PCT2 694 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 C6orf89Q6UWU4 347 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 KCTD8Q6ZWB6 473 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CCDC71Q8IV32 467 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 ITFG1Q8TB96 612 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 MBOAT7Q96N66 472 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 KCTD15Q96SI1 283 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 TMEM79Q9BSE2 394 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SLC6A16Q9GZN6 736 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 IRF2BPLQ9H1B7 796 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 OSBPL2Q9H1P3 480 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 OPTCQ9UBM4 332 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ADGRE2Q9UHX3 823 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 KCNS2Q9ULS6 477 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 AK6Q9Y3D8 172 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 TAF6LQ9Y6J9 622 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ATP7BP35670 1465 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CYP21A2P08686 494 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 DUSP3P51452 185 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 ERVK-9P63128 1117 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CAMK2BQ13554 666 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PDK4Q16654 411 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 OLFML1Q6UWY5 402 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 LAS2Q8IYD9 372 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CCDC71LQ8N9Z2 235 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 COPS5Q92905 334 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SMARCD2Q92925 531 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 MYOZ2Q9NPC6 264 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 COQ3Q9NZJ6 369 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 AGO2Q9UKV8 859 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 FADS3Q9Y5Q0 445 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 FGD5Q6ZNL6 1462 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PNMA6EA0A0J9YXQ4 647 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SLC27A2O14975 620 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 LILRB5O75023 590 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 FMO3P31513 532 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 TAS2R43P59537 309 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 TAS2R31P59538 309 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 LSM3P62310 102 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 PTCHD3Q3KNS1 767 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CYP27C1Q4G0S4 372 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CRB2Q5IJ48 1285 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 OR10A6Q8NH74 314 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PTCD3Q96EY7 689 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 TPD52L3Q96J77 140 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 DNTTIP1Q9H147 329 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 DPAGT1Q9H3H5 408 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 ABCB10Q9NRK6 738 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SMCO4Q9NRQ5 59 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 VPS28Q9UK41 221 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PCDHA10Q9Y5I2 948 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 A0A1W2PPW3 197 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 C17orf102A2RUQ5 167 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 F6UZH7 168 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 AGPSO00116 658 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 RNMTO43148 476 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 LSM8O95777 96 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 ALPPP05187 535 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 UBTFL6P0CB48 400 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 RARGP13631 454 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 AGTR1P30556 359 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 SCNN1AP37088 669 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 KDSRQ06136 332 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 PLGLAQ15195 96 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 DLG2Q15700 870 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 C20orf194Q5TEA3 1177 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 C17orf53Q8N3J3 647 aaPredicted RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 FAM133AQ8N9E0 248 aa5.39□□□□□ -1.55
USF3-202ENST00000478658 CNDP2Q96KP4 475 aaKnown RBP5.39□□□□□ -1.55
USF3-202ENST00000478658 EYA1Q99502 592 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms