RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 RARS2Q5T160 578 aaKnown RBP3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 GTF2H2CQ6P1K8 395 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNF704Q6ZNC4 412 aaPredicted RBP3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 FASTKD5Q7L8L6 764 aaKnown RBP3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 EPHX4Q8IUS5 362 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 MAP7D3Q8IWC1 876 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 EMC1Q8N766 993 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 NKAIN3Q8N8D7 197 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 BBS10Q8TAM1 723 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 SPATA20Q8TB22 786 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 SLC38A5Q8WUX1 472 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 FAM120BQ96EK7 910 aaKnown RBP3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 FEM1CQ96JP0 617 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 SMC6Q96SB8 1091 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 GAD1Q99259 594 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 SYT17Q9BSW7 474 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNF556Q9HAH1 456 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 LRRC4Q9HBW1 653 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 PLSCR4Q9NRQ2 329 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 DBNLQ9UJU6 430 aaKnown RBP3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 OR2W1Q9Y3N9 320 aa3.83□□□□□ -1.8
SMARCA1-204ENST00000478420 RSF1Q96T23 1441 aaPredicted RBP3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 AGAP14A8MT82 685 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 GLULP15104 373 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 DGKAP23743 735 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 RAD52P43351 418 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 FUT6P51993 359 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNF132P52740 706 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 IRF3Q14653 427 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 CDC37Q16543 378 aaPredicted RBP3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 KLHL22Q53GT1 634 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 KRTCAP3Q53RY4 240 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 RILPL1Q5EBL4 403 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 PLEKHS1Q5SXH7 462 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 SPATA1Q5VX52 437 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 TMEM198Q66K66 360 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 CLEC17AQ6ZS10 378 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 ASB18Q6ZVZ8 466 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 SZRD1Q7Z422 152 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 GALNT5Q7Z7M9 940 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 TMPRSS12Q86WS5 348 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 ARID3BQ8IVW6 561 aaPredicted RBP3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 MUC20Q8N307 709 aaPredicted RBP3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 RASGEF1CQ8N431 466 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 RFLNBQ8N5W9 214 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 GSDMBQ8TAX9 411 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 SLC44A1Q8WWI5 657 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 CD101Q93033 1021 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 SAT2Q96F10 170 aaPredicted RBP3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 LMLNQ96KR4 655 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 NEURL2Q9BR09 285 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 SRSF8Q9BRL6 282 aaKnown RBP3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 CSTL1Q9H114 145 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 FKRPQ9H9S5 495 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 SH3GLB2Q9NR46 395 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 TBC1D29Q9UFV1 150 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 RALYQ9UKM9 306 aaKnown RBP3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 GPR34Q9UPC5 381 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 TTLL3Q9Y4R7 772 aa3.82□□□□□ -1.8
SMARCA1-204ENST00000478420 ASPDHA6ND91 283 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 B4DLN1 442 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNHIT1O43257 154 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 WDR1O75083 606 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 LDB3O75112 727 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 FAM106CPP0CH98 169 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 CSH1P0DML2 217 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 CSH2P0DML3 217 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 MRPL12P52815 198 aaKnown RBP3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 MFAP4P55083 255 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 MRPS5P82675 430 aaKnown RBP3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 COG7P83436 770 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 PLIN5Q00G26 463 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 CHAF1BQ13112 559 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 CUL4AQ13619 759 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 WTAPQ15007 396 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNF718Q3SXZ3 478 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 ZNF672Q499Z4 452 aaPredicted RBP3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 RAB41Q5JT25 222 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 BRINP3Q76B58 766 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 ZSCAN30Q86W11 494 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 PM20D2Q8IYS1 436 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 SCYL3Q8IZE3 742 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 C17orf53Q8N3J3 647 aaPredicted RBP3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 SLC5A8Q8N695 610 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 MAB21L3Q8N8X9 362 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 IL17RCQ8NAC3 791 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 SLC38A9Q8NBW4 561 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 PPP4R1Q8TF05 950 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 TMEM255BQ8WV15 326 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 NSUN4Q96CB9 384 aaKnown RBP3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 RSRC1Q96IZ7 334 aaKnown RBP3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 PKP4Q99569 1192 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 LRMDAQ9H2I8 198 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 KLHL1Q9NR64 748 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 ANKEF1Q9NU02 776 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 NSMCE4AQ9NXX6 385 aa3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 ADD3Q9UEY8 706 aaKnown RBP3.81□□□□□ -1.8
SMARCA1-204ENST00000478420 A0A1W2PP11 408 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 A0A1W2PQ09 198 aa3.8□□□□□ -1.8
SMARCA1-204ENST00000478420 A0A1W2PS18 150 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms