RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CDH15P55291 814 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 TLE2Q04725 743 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 SERINC3Q13530 473 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 CEACAM7Q14002 265 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 HIST2H2ACQ16777 129 aaPredicted RBP10.93□□□□□ -0.66
COL27A1-204ENST00000477421 SETMARQ53H47 684 aaPredicted RBP10.93□□□□□ -0.66
COL27A1-204ENST00000477421 GPR107Q5VW38 600 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 PLPP4Q5VZY2 271 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 HIST2H2AA3Q6FI13 130 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 BNIPLQ7Z465 357 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 PLD3Q8IV08 490 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 TNIP2Q8NFZ5 429 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 OR2T12Q8NG77 320 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 SORT1Q99523 831 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 UBR3Q6ZT12 1888 aa10.93□□□□□ -0.66
COL27A1-204ENST00000477421 PPP6CO00743 305 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 SDHDO14521 159 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 GPR39O43194 453 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 SNUPNO95149 360 aaKnown RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 KCNA5P22460 613 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 RFX3P48380 749 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 RPIAP49247 311 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 GPR17Q13304 367 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 ADGRE1Q14246 886 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 XKR6Q5GH73 641 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 MORN1Q5T089 497 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 ZCCHC8Q6NZY4 707 aaKnown RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 FBXL19Q6PCT2 694 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 ING5Q8WYH8 240 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 PPP3R2Q96LZ3 170 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 PANX1Q96RD7 426 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 MYOCQ99972 504 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 MIEF1Q9NQG6 463 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 ZNF229Q9UJW7 825 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 FADS3Q9Y5Q0 445 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 A0A087WXM4 84 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 STK16O75716 305 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 GPC1P35052 558 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 POLR2LP62875 67 aaKnown RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 FAM174BQ3ZCQ3 159 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 C17orf99Q6UX52 265 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 RANBP10Q6VN20 620 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 RD3Q7Z3Z2 195 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 EID3Q8N140 333 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 ENDOVQ8N8Q3 282 aaKnown RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 OR10A6Q8NH74 314 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 MZB1Q8WU39 189 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 GLMNQ92990 594 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 IMP4Q96G21 291 aaKnown RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 ZFRQ96KR1 1074 aaKnown RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 IL12RB2Q99665 862 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 NSUN3Q9H649 340 aaKnown RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 ABCB8Q9NUT2 735 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 SRRDQ9UH36 339 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 RREB1Q92766 1687 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 COL4A5P29400 1685 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 LINC00854A0A1B0GVQ3 168 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 CLDN7O95471 211 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 IL1BP01584 269 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 CASP9P55211 416 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 MTA1Q13330 715 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 KCTD21Q4G0X4 260 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 PM20D1Q6GTS8 502 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 ELMSAN1Q6PJG2 1045 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 GPR180Q86V85 440 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 CMTM8Q8IZV2 173 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 SLC45A3Q96JT2 553 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 PLSCR2Q9NRY7 297 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 TBC1D23Q9NUY8 699 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 ADGRE2Q9UHX3 823 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 PADI4Q9UM07 663 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 RFXANKO14593 260 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 MAPK1P28482 360 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 IDH2P48735 452 aaKnown RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 NR1H2P55055 460 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 MAD2L1Q13257 205 aaPredicted RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 GRB7Q14451 532 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 TXNDC11Q6PKC3 985 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 ALKAL1Q6UXT8 129 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 APLFQ8IW19 511 aaPredicted RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 TMEM132CQ8N3T6 1108 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 C8orf48Q96LL4 319 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 SMAD5Q99717 465 aaKnown RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 HOPXQ9BPY8 73 aaPredicted RBP10.92□□□□□ -0.66
COL27A1-204ENST00000477421 UGT2B28Q9BY64 529 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 C1orf21Q9H246 121 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 GJD2Q9UKL4 321 aa10.92□□□□□ -0.66
COL27A1-204ENST00000477421 TBC1D3BA6NDS4 549 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 PDZK1P1A8MUH7 402 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 K7ERQ8 282 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 CATP04040 527 aaKnown RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 PRDX6P30041 224 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 GNPDA1P46926 289 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 POLD2P49005 469 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 PGFP49763 221 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 CDKN1CP49918 316 aaPredicted RBP10.91□□□□□ -0.66
COL27A1-204ENST00000477421 STC1P52823 247 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 MTTPP55157 894 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 UFM1P61960 85 aa10.91□□□□□ -0.66
COL27A1-204ENST00000477421 GTF2H2Q13888 395 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms