RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	XPO7	Q9UIA9	1087 aa	Known RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TMPRSS11E	Q9UL52	423 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	RAB23	Q9ULC3	237 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NENF	Q9UMX5	172 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TBC1D30	Q9Y2I9	924 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	JRKL	Q9Y4A0	524 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PCDHA3	Q9Y5H8	950 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HELZ	P42694	1942 aa	Known RBP	4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ANAPC1	Q9H1A4	1944 aa		4.56	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DOCK8	Q8NF50	2099 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DOCK6	Q96HP0	2047 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NOTCH4	Q99466	2003 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GOLGA6L10	A0A0M3HER8	536 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	EDDM13	A0A1B0GTR0	161 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289		A0A1W2PQ67	120 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PRSS38	A1L453	326 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TARSL2	A2RTX5	802 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CTAGE9	A4FU28	777 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GOLGA6C	A6NDK9	693 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GOLGA6B	A6NDN3	693 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	RASA4B	C9J798	803 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289		H7C0C1	242 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	MCF2L	O15068	1137 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	RASA4	O43374	803 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KDELR3	O43731	214 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NDUFS2	O75306	463 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZNF217	O75362	1048 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CNTN5	O94779	1100 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	APBB3	O95704	486 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FTCD	O95954	541 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	IGSF6	O95976	241 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NUDT3	O95989	172 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	EGF	P01133	1207 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DCN	P07585	359 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CISD3	P0C7P0	127 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GOLGA6D	P0CG33	693 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CHRNB1	P11230	501 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GYPE	P15421	78 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TGM2	P21980	687 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HLA-F	P30511	346 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	AVPR2	P30518	371 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HOXC13	P31276	330 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CASQ1	P31415	396 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CD70	P32970	193 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CTNNA1	P35221	906 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HSPA9	P38646	679 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ATP5O	P48047	213 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GZMK	P49863	264 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	WNT3A	P56704	352 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	RHOA	P61586	193 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GNG11	P61952	73 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DYNLT1	P63172	113 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SLC25A11	Q02978	314 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ITK	Q08881	620 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PRPSAP1	Q14558	356 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZNF234	Q14588	700 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	RFTN1	Q14699	578 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GEN1	Q17RS7	908 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TIGD2	Q4W5G0	525 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ALF	Q53S48	1182 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	INO80D	Q53TQ3	878 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ANKRD20A8P	Q5CZ79	823 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	MARC1	Q5VT66	337 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OTUD1	Q5VV17	481 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DOK3	Q7L591	496 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SYT13	Q7L8C5	426 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	C14orf80	Q86SX3	495 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CDKL3	Q8IVW4	592 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	UMODL1-AS1	Q8N2C9	162 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PYROXD2	Q8N2H3	581 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CCDC33	Q8N5R6	958 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ALLC	Q8N6M5	410 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PCDH20	Q8N6Y1	951 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	BEND2	Q8NDZ0	799 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GAB3	Q8WWW8	586 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ATRIP	Q8WXE1	791 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OR8D1	Q8WZ84	308 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PRCC	Q92733	491 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ARHGEF2	Q92974	986 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TTC17	Q96AE7	1141 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	MYEOV	Q96EZ4	313 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZNF764	Q96H86	408 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PBK	Q96KB5	322 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZNF599	Q96NL3	588 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PPP1R2P1	Q96PQ5	205 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CSPG4P5	Q96PW8	444 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	RNF157	Q96PX1	679 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FEM1A	Q9BSK4	669 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TRIM7	Q9C029	511 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	EPC1	Q9H2F5	836 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	EPHX3	Q9H6B9	360 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HOMER3	Q9NSC5	361 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	RBM12	Q9NTZ6	932 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KLHL11	Q9NVR0	708 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms