RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 FAM90A24PP0C7X0 464 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 C8orf89P0DMQ9 161 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM225BP0DP42 221 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 SKILP12757 684 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 PKMP14618 531 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 SNRPBP14678 240 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ARSAP15289 507 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 FOSL2P15408 326 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 DRD4P21917 467 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CALB2P22676 271 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CD27P26842 260 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 NTSR1P30989 418 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 SLC6A4P31645 630 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CDAP32320 146 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CSF2RBP32927 897 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 LONP1P36776 959 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 IGHMBP2P38935 993 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 PBX1P40424 430 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CRKLP46109 303 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 PEX5P50542 639 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CLCNKAP51800 687 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF75DP51815 510 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 OAZ1P54368 228 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 HADHBP55084 474 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 F2RL1P55085 397 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 MTTPP55157 894 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ADARP55265 1226 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 OXCT1P55809 520 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CLRN1P58418 232 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 FAM3BP58499 235 aaPredicted RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 LILRA4P59901 499 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TIAL1Q01085 375 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CXCL9Q07325 125 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TRDNQ13061 729 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 DUSP8Q13202 625 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 FHL3Q13643 280 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 NEDD9Q14511 834 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 NR1I3Q14994 352 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ARHGAP19Q14CB8 494 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 SHBQ15464 509 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 MAPK11Q15759 364 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 UGCGQ16739 394 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 PFKFB3Q16875 520 aaPredicted RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 EDRF1Q3B7T1 1238 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 PTCHD3Q3KNS1 767 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 NADK2Q4G0N4 442 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 IFI44LQ53G44 452 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF667Q5HYK9 610 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 UBAP2Q5T6F2 1119 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ARHGEF16Q5VV41 709 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 OR6B2Q6IFH4 312 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 GLB1LQ6UWU2 654 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 C17orf99Q6UX52 265 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 IL20RBQ6UXL0 311 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ETV3LQ6ZN32 361 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 MTSS1LQ765P7 747 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 DOK3Q7L591 496 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 DET1Q7L5Y6 550 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 LUZP1Q86V48 1076 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CAND1Q86VP6 1230 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 AMZ2Q86W34 360 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CLEC10AQ8IUN9 316 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 PSTKQ8IV42 348 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ARID3BQ8IVW6 561 aaPredicted RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 DHX40Q8IX18 779 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 DNAJC10Q8IXB1 793 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 FAM20CQ8IXL6 584 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 SLC15A3Q8IY34 581 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ABRAQ8N0Z2 381 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 BCL6BQ8N143 479 aaPredicted RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CRIPAKQ8N1N5 446 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ARFGAP2Q8N6H7 521 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 PDPRQ8NCN5 879 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TMIEQ8NEW7 156 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 STEAP2Q8NFT2 490 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 OR5M3Q8NGP4 307 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 LRRC8CQ8TDW0 803 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ACTRT2Q8TDY3 377 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CHURC1Q8WUH1 139 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ATL1Q8WXF7 558 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 NPIPB3Q92617 1050 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 GCDHQ92947 438 aaPredicted RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 NACC2Q96BF6 587 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 PHF21BQ96EK2 531 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 DHTKD1Q96HY7 919 aaPredicted RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 ATP6V1G3Q96LB4 118 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 MYRFLQ96LU7 910 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TCEANC2Q96MN5 208 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TTC25Q96NG3 672 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TBC1D32Q96NH3 1257 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM209Q96SK2 561 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CDX2Q99626 313 aaPredicted RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 G6PC3Q9BUM1 346 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 CARD11Q9BXL7 1154 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 RAB33BQ9H082 229 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 DDX47Q9H0S4 455 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM168Q9H0V1 697 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 IKZF4Q9H2S9 585 aa2.88□□□□□ -1.95
HMGN4-202ENST00000477243 NSUN3Q9H649 340 aaKnown RBP2.88□□□□□ -1.95
HMGN4-202ENST00000477243 RNPEPL1Q9HAU8 725 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms