RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 DHX9Q08211 1270 aaKnown RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 PDIA2Q13087 525 aaKnown RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 MSLNQ13421 630 aaPredicted RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 SEPT6Q14141 434 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 CDKN3Q16667 212 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 DNAJC21Q5F1R6 531 aaKnown RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 HP1BP3Q5SSJ5 553 aaPredicted RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 AGBL4Q5VU57 503 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 EFL1Q7Z2Z2 1120 aaKnown RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 PDIK1LQ8N165 341 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 NDUFAF2Q8N183 169 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 AGGF1Q8N302 714 aaeCLIP11.48□□□□□ -0.57
LSM2-212ENST00000477182 MPP5Q8N3R9 675 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 TMEM145Q8NBT3 493 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 FAM174AQ8TBP5 190 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 FAM131CQ96AQ9 280 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 MCCC1Q96RQ3 725 aaPredicted RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 FMO2Q99518 471 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 FOXP3Q9BZS1 431 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 SAYSD1Q9NPB0 183 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 SYBUQ9NX95 663 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 BFARQ9NZS9 450 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 B4GALT6Q9UBX8 382 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 TUBD1Q9UJT1 453 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 PPIL1Q9Y3C6 166 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 ZNF711Q9Y462 761 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 RP1P56715 2156 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 PMS2P1A4D2B8 440 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 TMX2-CTNND1H3BSU7 103 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 SPINT1O43278 529 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 FAM153BP0C7A2 387 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 CYP2A6P11509 494 aaPredicted RBP11.47□□□□□ -0.57
LSM2-212ENST00000477182 MCM3P25205 808 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 NFKBIAP25963 317 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 VIPR1P32241 457 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 MMP12P39900 470 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 CLCA4Q14CN2 919 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 FASTKD3Q14CZ7 662 aaKnown RBP11.47□□□□□ -0.57
LSM2-212ENST00000477182 TGIF1Q15583 401 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 FAM153CQ494X1 144 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 CCDC38Q502W7 563 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 ERAP2Q6P179 960 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 WDR93Q6P2C0 686 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 GUSBP11Q6P575 273 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 CENPUQ71F23 418 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 LYSMD3Q7Z3D4 306 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 TSPAN33Q86UF1 283 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 DCP2Q8IU60 420 aaKnown RBP11.47□□□□□ -0.57
LSM2-212ENST00000477182 ANKMY2Q8IV38 441 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 FBXO39Q8N4B4 442 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 EIF1ADQ8N9N8 165 aaKnown RBP11.47□□□□□ -0.57
LSM2-212ENST00000477182 GLMNQ92990 594 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 SCRN2Q96FV2 425 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 SIGLEC10Q96LC7 697 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 MAGEE1Q9HCI5 957 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 GGT7Q9UJ14 662 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 PCDHB11Q9Y5F2 797 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 FADS3Q9Y5Q0 445 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 MAD1L1Q9Y6D9 718 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 CSNK1G3Q9Y6M4 447 aa11.47□□□□□ -0.57
LSM2-212ENST00000477182 C2CD3Q4AC94 2353 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 C1orf232A0A0U1RR37 186 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 CCDC78A2IDD5 438 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 SDR42E2A6NKP2 422 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 E7ESA3 106 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 H3BM21 787 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 NEMP1O14524 444 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 AURKAO14965 403 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 AREL1O15033 823 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 EIF3HO15372 352 aaKnown RBP eCLIP11.46□□□□□ -0.57
LSM2-212ENST00000477182 NVLO15381 856 aaKnown RBP11.46□□□□□ -0.57
LSM2-212ENST00000477182 BUD23O43709 281 aaKnown RBP11.46□□□□□ -0.57
LSM2-212ENST00000477182 CLDN7O95471 211 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 LHCGRP22888 699 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 AKT2P31751 481 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 ELK3P41970 407 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 RPIAP49247 311 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 SUOXP51687 545 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 TAS2R38P59533 333 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 CCDC15Q0P6D6 951 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 ELP6Q0PNE2 266 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 RALGDSQ12967 914 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 KCNAB2Q13303 367 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 ARHGEF7Q14155 803 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 SPIDRQ14159 915 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 NR0B2Q15466 257 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 LRRC66Q68CR7 880 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 HIST2H2BCQ6DN03 193 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 CASC4Q6P4E1 433 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 CRTC1Q6UUV9 634 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 DPPA4Q7L190 304 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 RAB11FIP2Q7L804 512 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 GLT6D1Q7Z4J2 308 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 ATCAYQ86WG3 371 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 IGDCC3Q8IVU1 814 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 TTC30BQ8N4P2 665 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 PPHLN1Q8NEY8 458 aaKnown RBP11.46□□□□□ -0.57
LSM2-212ENST00000477182 BRSK1Q8TDC3 778 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 NAT6Q93015 286 aa11.46□□□□□ -0.57
LSM2-212ENST00000477182 RAB7BQ96AH8 199 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms