RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 BTN3A1O00481 513 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 NR5A2O00482 541 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 SCAMP3O14828 347 aaKnown RBP16.3■□□□□ 0.2
TMEM53-208ENST00000476724 GIPC1O14908 333 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 LINC00032P0C843 101 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 PRR35P0CG20 571 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 HSD17B1P14061 328 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 ZNF26P17031 533 aaPredicted RBP16.3■□□□□ 0.2
TMEM53-208ENST00000476724 CTNNB1P35222 781 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 SGSHP51688 502 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 BNIP2Q12982 314 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 C6orf10Q5SRN2 563 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 PSAPL1Q6NUJ1 521 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 LILRA6Q6PI73 481 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 RETREG3Q86VR2 466 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 HS6ST3Q8IZP7 471 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 TTC30BQ8N4P2 665 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 OR56A4Q8NGH8 313 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 SPATA16Q9BXB7 569 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 SLC24A3Q9HC58 644 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 SMPD4Q9NXE4 827 aa16.3■□□□□ 0.2
TMEM53-208ENST00000476724 AQP12BA6NM10 295 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 SNX2O60749 519 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 TMCC1O94876 653 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 TNFAIP8O95379 198 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 C1RP00736 705 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 BMPR1AP36894 532 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 ZXDBP98169 803 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 CREMQ03060 361 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 EML3Q32P44 896 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 ZRANB3Q5FWF4 1079 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 PLPP4Q5VZY2 271 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 TXNDC8Q6A555 127 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 BLOC1S3Q6QNY0 202 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 GPSM1Q86YR5 675 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 AQP12AQ8IXF9 295 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 PIANPQ8IYJ0 282 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 OR2T34Q8NGX1 318 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 OR2T3Q8NH03 318 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 ZFRQ96KR1 1074 aaKnown RBP16.29■□□□□ 0.2
TMEM53-208ENST00000476724 KCNA7Q96RP8 456 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 C17orf80Q9BSJ5 609 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 HGH1Q9BTY7 390 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 ARMC1Q9NVT9 282 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 PCTPQ9UKL6 214 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 GPR45Q9Y5Y3 372 aa16.29■□□□□ 0.2
TMEM53-208ENST00000476724 MTCL1Q9Y4B5 1905 aaKnown RBP16.28■□□□□ 0.2
TMEM53-208ENST00000476724 TYW5A2RUC4 315 aaKnown RBP16.28■□□□□ 0.2
TMEM53-208ENST00000476724 NPEPPSL1A6NEC2 478 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 TSPAN3O60637 253 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 TSPAN12O95859 305 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CD160O95971 181 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 MYOGP15173 224 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CDKN1CP49918 316 aaPredicted RBP16.28■□□□□ 0.2
TMEM53-208ENST00000476724 SH3BGRP55822 239 aaPredicted RBP16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CYP4F8P98187 520 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 TRAF2Q12933 501 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 VPS26BQ4G0F5 336 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CTSL3PQ5NE16 218 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 GALNT4Q8N4A0 578 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 ARL14EPQ8N8R7 260 aaPredicted RBP16.28■□□□□ 0.2
TMEM53-208ENST00000476724 SNX31Q8N9S9 440 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CD200R1Q8TD46 325 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 SLCO4A1Q96BD0 722 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 PDLIM5Q96HC4 596 aaKnown RBP16.28■□□□□ 0.2
TMEM53-208ENST00000476724 C19orf43Q9BQ61 176 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 ZNF696Q9H7X3 374 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 PIDD1Q9HB75 910 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 UBAP1Q9NZ09 502 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 IKZF3Q9UKT9 509 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 PKP3Q9Y446 797 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 PCDHB1Q9Y5F3 818 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 MYO7AQ13402 2215 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 E5RI56 91 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CYBBP04839 570 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 C8AP07357 584 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 FAM58BPP0C7Q3 252 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 MBL2P11226 248 aaPredicted RBP16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CHRM3P20309 590 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CAPN3P20807 821 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 GABRR2P28476 465 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CACNG1Q06432 222 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CERS6Q6ZMG9 384 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 GAREM2Q75VX8 874 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 EFHBQ8N7U6 833 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 SIDT2Q8NBJ9 832 aaKnown RBP16.28■□□□□ 0.2
TMEM53-208ENST00000476724 POF1BQ8WVV4 589 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 LINGO1Q96FE5 620 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 ZNF597Q96LX8 424 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 OSBPL11Q9BXB4 747 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 MUC13Q9H3R2 512 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 MAGEE1Q9HCI5 957 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 RIC8BQ9NVN3 520 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 GALPQ9UBC7 116 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 PTGDR2Q9Y5Y4 395 aa16.28■□□□□ 0.2
TMEM53-208ENST00000476724 CDH23Q9H251 3354 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 A0A1W2PP18 115 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 LINC01553A4QN01 128 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 H0Y626 953 aa16.27■□□□□ 0.2
TMEM53-208ENST00000476724 FZD6O60353 706 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms