RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 NR6A1Q15406 480 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 SMTNL2Q2TAL5 461 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 PLA2G4EQ3MJ16 856 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 TDRD12Q587J7 1177 aaKnown RBP16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 ALG1LQ6GMV1 187 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 ADGRG6Q86SQ4 1221 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 SIDT2Q8NBJ9 832 aaKnown RBP16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 FDCSPQ8NFU4 85 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 NEK11Q8NG66 645 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 PNPLA2Q96AD5 504 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 PCMTD1Q96MG8 357 aaPredicted RBP16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 PHF12Q96QT6 1004 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 NUDT9Q9BW91 350 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 RAB33BQ9H082 229 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 PKD2L2Q9NZM6 624 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 SLC5A6Q9Y289 635 aa16.16■□□□□ 0.18
APOBEC3F-203ENST00000476513 CELSR2Q9HCU4 2923 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 OR52A4PA6NMU1 304 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 CHUKO15111 745 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 CBX6O95503 412 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 TPM2P07951 284 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 ZNF7P17097 686 aaPredicted RBP16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 RPL26P61254 145 aaKnown RBP16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 PDE1BQ01064 536 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 INSCQ1MX18 579 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 CDKAL1Q5VV42 579 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 ABRAXAS1Q6UWZ7 409 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 HPS6Q86YV9 775 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 RHOT1Q8IXI2 618 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 ADAMTS17Q8TE56 1095 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 UBXN4Q92575 508 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 SNRNP40Q96DI7 357 aaKnown RBP16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 C5orf34Q96MH7 638 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 SYT11Q9BT88 431 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 CLSTN2Q9H4D0 955 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 TRIM39Q9HCM9 518 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 FGF21Q9NSA1 209 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 DTLQ9NZJ0 730 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 RPL26L1Q9UNX3 145 aaKnown RBP16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 DNAJC16Q9Y2G8 782 aa16.15■□□□□ 0.18
APOBEC3F-203ENST00000476513 CSMD1Q96PZ7 3565 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 SSU72P8A0A1W2PR75 194 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 RGSL1A5PLK6 1076 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 SLC25A14O95258 325 aaPredicted RBP16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 EBLN1P0CF75 366 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 TCF4P15884 667 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 RPL10P27635 214 aaKnown RBP16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 SERPINB6P35237 376 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 ACY1Q03154 408 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 ANKRD20A8PQ5CZ79 823 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 CERS6Q6ZMG9 384 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 BPHLQ86WA6 291 aaPredicted RBP16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 LRRC49Q8IUZ0 686 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 RBM12BQ8IXT5 1001 aaKnown RBP16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 ARRDC2Q8TBH0 407 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 CCHCR1Q8TD31 782 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 HSPH1Q92598 858 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 MR1Q95460 341 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 ZNF514Q96K75 400 aaPredicted RBP16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 PCDH9Q9HC56 1237 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 C2CD3Q4AC94 2353 aa16.14■□□□□ 0.17
APOBEC3F-203ENST00000476513 A6NL46 340 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 GPR89AB7ZAQ6 455 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 KMOO15229 486 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 ZNF185O15231 689 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 CPNE3O75131 537 aaKnown RBP16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 TMEM63AO94886 807 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 GPR89BP0CG08 455 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 CA4P22748 312 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 CES1P23141 567 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 IL4RP24394 825 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 PCK1P35558 622 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 DRG2P55039 364 aaKnown RBP16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 RIPPLY3P57055 190 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 NIPAL4Q0D2K0 466 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 GPS2Q13227 327 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 QPCTQ16769 361 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 BOLA3Q53S33 107 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 ZRANB3Q5FWF4 1079 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 CT47A1Q5JQC4 288 aaPredicted RBP16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 ZNF569Q5MCW4 686 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 AGAP9Q5VTM2 703 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 IZUMO3Q5VZ72 239 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 PPP1R2P3Q6NXS1 205 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 WASH2PQ6VEQ5 465 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 ZNF517Q6ZMY9 492 aaPredicted RBP16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 LRRTM4Q86VH4 590 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 TTC13Q8NBP0 860 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 ENOX1Q8TC92 643 aaKnown RBP16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 MAML1Q92585 1016 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 EID2BQ96D98 161 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 CXorf40BQ96DE9 158 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 TIMM29Q9BSF4 260 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 SPATA16Q9BXB7 569 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 CHST8Q9H2A9 424 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 WASH6PQ9NQA3 447 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 ASF1BQ9NVP2 202 aa16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 G3BP2Q9UN86 482 aaKnown RBP16.13■□□□□ 0.17
APOBEC3F-203ENST00000476513 TTLL3Q9Y4R7 772 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms