RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ZNF521Q96K83 1311 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 LINC01553A4QN01 128 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 J3QR06 171 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 TOMM70O94826 608 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 GGPS1O95749 300 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 NR2F2P24468 414 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 ZNF81P51508 661 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 CBWD6Q4V339 395 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 CBWD3Q5JTY5 395 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 CAMKMTQ7Z624 323 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 VSIG1Q86XK7 387 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 PGBD5Q8N414 524 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 RMDN1Q96DB5 314 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 ZNF830Q96NB3 372 aaPredicted RBP5.85□□□□□ -1.47
VPS50-212ENST00000476413 SYT17Q9BSW7 474 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 GOLPH3LQ9H4A5 285 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 RAD21L1Q9H4I0 556 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 MCM9Q9NXL9 1143 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 HAO2Q9NYQ3 351 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 OSGIN1Q9UJX0 560 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 FBXL2Q9UKC9 423 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 KLHL20Q9Y2M5 609 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 LOXL2Q9Y4K0 774 aa5.85□□□□□ -1.47
VPS50-212ENST00000476413 RFPL2O75678 378 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 SERPINI2O75830 405 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 GAGE7O76087 117 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 GAGE12FP0CL80 117 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 GAGE12GP0CL81 117 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 GAGE12IP0CL82 117 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 SRCP12931 536 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 MC5RP33032 325 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 PLCD1P51178 756 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 PGGT1BP53609 377 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 CDH13P55290 713 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 DDR1Q08345 913 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 GAGE1Q13065 139 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 GAGE4Q13068 117 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 MEP1AQ16819 746 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 KRBOX4Q5JUW0 171 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 EFHC1Q5JVL4 640 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 RGMBQ6NW40 437 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 IL27RAQ6UWB1 636 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 SLFN11Q7Z7L1 901 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 ZNF595Q8IYB9 648 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 PM20D2Q8IYS1 436 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 CLIP4Q8N3C7 705 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 GCSAMQ8N6F7 178 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 EMC1Q8N766 993 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 SLC44A1Q8WWI5 657 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 HMCESQ96FZ2 354 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 EDEM3Q9BZQ6 932 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 SELENONQ9NZV5 590 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 ZNF112Q9UJU3 913 aa5.84□□□□□ -1.47
VPS50-212ENST00000476413 FEZF1A0PJY2 475 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 TMEM189-UBE2V1I3L0A0 370 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 HS3ST1O14792 307 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 CLGNO14967 610 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 NDUFS4O43181 175 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 TADA2AO75478 443 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 WISP2O76076 250 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 SLCO2B1O94956 709 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 CRYABP02511 175 aaKnown RBP5.83□□□□□ -1.48
VPS50-212ENST00000476413 S1PR1P21453 382 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 KCNA5P22460 613 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 CORO1AP31146 461 aaKnown RBP5.83□□□□□ -1.48
VPS50-212ENST00000476413 PCYT1AP49585 367 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 RUNX1T1Q06455 604 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 CRYZQ08257 329 aaKnown RBP5.83□□□□□ -1.48
VPS50-212ENST00000476413 UBE2V1Q13404 147 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 NFATC4Q14934 902 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 C1QTNF12Q5T7M4 302 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 KRT80Q6KB66 452 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 Q75L30 129 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 GLCCI1Q86VQ1 547 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 FBXO39Q8N4B4 442 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 ZNF114Q8NC26 417 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 THAP6Q8TBB0 222 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 TBC1D16Q8TBP0 767 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 WDR20Q8TBZ3 569 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 SEMA3CQ99985 751 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 OPA3Q9H6K4 179 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 SNX9Q9Y5X1 595 aa5.83□□□□□ -1.48
VPS50-212ENST00000476413 A0A1W2PPM1 405 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 SRRM3A6NNA2 597 aaPredicted RBP5.82□□□□□ -1.48
VPS50-212ENST00000476413 MID1O15344 667 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 KCNJ13O60928 360 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 CLDN14O95500 239 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 FYNP06241 537 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 QDPRP09417 244 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 HOXC6P09630 235 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 ZNF12P17014 697 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 DNASE1P24855 282 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 KRT33BQ14525 404 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 MELKQ14680 651 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 SNAPC1Q16533 368 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 LETM2Q2VYF4 491 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 XKR9Q5GH70 373 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 FAM47EQ6ZV65 393 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 FJX1Q86VR8 437 aa5.82□□□□□ -1.48
VPS50-212ENST00000476413 UTP15Q8TED0 518 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms