RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 INSCQ1MX18 579 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 MAP9Q49MG5 647 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 GPRC6AQ5T6X5 926 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 RAB11FIP2Q7L804 512 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 DDHD1Q8NEL9 900 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 OR13C4Q8NGS5 318 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 CRELD1Q96HD1 420 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 ALS2CR12Q96Q35 445 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 TIMM29Q9BSF4 260 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 STRADBQ9C0K7 418 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 OSGEPL1Q9H4B0 414 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 GRPEL1Q9HAV7 217 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 SCHIP1Q9P0W5 487 aaPredicted RBP20.86■□□□□ 0.93
LIME1-204ENST00000476183 DNAJC16Q9Y2G8 782 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 PPP2R2CQ9Y2T4 447 aa20.86■□□□□ 0.93
LIME1-204ENST00000476183 AHCTF1Q8WYP5 2266 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 CDRT15L2A8MXV6 281 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 AGRPO00253 132 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 PLD2O14939 933 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 TNFSF15O95150 251 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 PRAMEF1O95521 474 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 HOXB3P14651 431 aaPredicted RBP20.85■□□□□ 0.93
LIME1-204ENST00000476183 RBMS1P29558 406 aaKnown RBP20.85■□□□□ 0.93
LIME1-204ENST00000476183 CSF2RBP32927 897 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 ZNF140P52738 457 aaPredicted RBP20.85■□□□□ 0.93
LIME1-204ENST00000476183 CTSCP53634 463 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 XIAPP98170 497 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 ITGA9Q13797 1035 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 SIX1Q15475 284 aaPredicted RBP20.85■□□□□ 0.93
LIME1-204ENST00000476183 P3H1Q32P28 736 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 LDLRAP1Q5SW96 308 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 MICALCLQ6ZW33 695 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 PIM3Q86V86 326 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 FBXO39Q8N4B4 442 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 RASGEF1AQ8N9B8 481 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 ZNF398Q8TD17 642 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 TLR10Q9BXR5 811 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 LRRC40Q9H9A6 602 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 SARS2Q9NP81 518 aaKnown RBP20.85■□□□□ 0.93
LIME1-204ENST00000476183 THSD1Q9NS62 852 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 SMOXQ9NWM0 555 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 KCNK4Q9NYG8 393 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 LHX6Q9UPM6 363 aa20.85■□□□□ 0.93
LIME1-204ENST00000476183 LDB2O43679 373 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 CRTAMO95727 393 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 AP2A1O95782 977 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 TPH1P17752 444 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 PCBP4P57723 403 aaKnown RBP20.84■□□□□ 0.93
LIME1-204ENST00000476183 TMPRSS15P98073 1019 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 HHEXQ03014 270 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 CCDC173Q0VFZ6 552 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 EIF3IQ13347 325 aaKnown RBP20.84■□□□□ 0.93
LIME1-204ENST00000476183 NFATC2Q13469 925 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 SNX1Q13596 522 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 GTF2H3Q13889 308 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 PRUNE1Q86TP1 453 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 TRAPPC5Q8IUR0 188 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 NAF1Q96HR8 494 aaKnown RBP20.84■□□□□ 0.93
LIME1-204ENST00000476183 SLC38A3Q99624 504 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 FRMD8P1Q9BZ68 369 aaPredicted RBP20.84■□□□□ 0.93
LIME1-204ENST00000476183 PIH1D1Q9NWS0 290 aaKnown RBP20.84■□□□□ 0.93
LIME1-204ENST00000476183 TMEM9Q9P0T7 183 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 FEZ2Q9UHY8 353 aaPredicted RBP20.84■□□□□ 0.93
LIME1-204ENST00000476183 LOXL2Q9Y4K0 774 aa20.84■□□□□ 0.93
LIME1-204ENST00000476183 KIR2DS5A0A0G2JLQ3 304 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 A0A0G2JNG1 304 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 IGHV5-10-1A0A0J9YXX1 117 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 KIR2DS3K7RE56 304 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 CCL22O00626 93 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 ZW10O43264 779 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 SRP72O76094 671 aaKnown RBP20.83■□□□□ 0.93
LIME1-204ENST00000476183 ETS1P14921 441 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 STIP1P31948 543 aaKnown RBP20.83■□□□□ 0.93
LIME1-204ENST00000476183 UBE2IP63279 158 aaKnown RBP20.83■□□□□ 0.93
LIME1-204ENST00000476183 SQSTM1Q13501 440 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 KIR2DS5Q14953 304 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 C16orf72Q14CZ0 275 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 SEPT7Q16181 437 aaKnown RBP20.83■□□□□ 0.93
LIME1-204ENST00000476183 CLPPQ16740 277 aaPredicted RBP20.83■□□□□ 0.93
LIME1-204ENST00000476183 PHF19Q5T6S3 580 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 SLC9B2Q86UD5 537 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 NAT14Q8WUY8 206 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 CCDC97Q96F63 343 aaPredicted RBP20.83■□□□□ 0.93
LIME1-204ENST00000476183 ASB8Q9H765 288 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 CPNE7Q9UBL6 633 aa20.83■□□□□ 0.93
LIME1-204ENST00000476183 LOC400499M0QZD8 3231 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 OR5K4A6NMS3 321 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 RRP8O43159 456 aaKnown RBP20.82■□□□□ 0.92
LIME1-204ENST00000476183 IFNB1P01574 187 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 ITGA2BP08514 1039 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 SLC2A4P14672 509 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 BRAFP15056 766 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 ITIH1P19827 911 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 MPSTP25325 297 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 ABCG1P45844 678 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 GPLD1P80108 840 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 TMEM220Q6QAJ8 160 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 LRRC69Q6ZNQ3 347 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 CLEC14AQ86T13 490 aa20.82■□□□□ 0.92
LIME1-204ENST00000476183 SPACA3Q8IXA5 215 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms