RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 TMEM179Q6ZVK1 233 aa4.83□□□□□ -1.64
PRKD3-208ENST00000475912 H1FNTQ75WM6 255 aaPredicted RBP4.83□□□□□ -1.64
PRKD3-208ENST00000475912 FBXO16Q8IX29 292 aaPredicted RBP4.83□□□□□ -1.64
PRKD3-208ENST00000475912 FTSJ3Q8IY81 847 aaKnown RBP4.83□□□□□ -1.64
PRKD3-208ENST00000475912 TMEM105Q8N8V8 129 aa4.83□□□□□ -1.64
PRKD3-208ENST00000475912 CEP70Q8NHQ1 597 aa4.83□□□□□ -1.64
PRKD3-208ENST00000475912 TEX13BQ9BXU2 312 aa4.83□□□□□ -1.64
PRKD3-208ENST00000475912 CTNNA3Q9UI47 895 aa4.83□□□□□ -1.64
PRKD3-208ENST00000475912 AGO1Q9UL18 857 aaKnown RBP4.83□□□□□ -1.64
PRKD3-208ENST00000475912 CLDN16Q9Y5I7 305 aa4.83□□□□□ -1.64
PRKD3-208ENST00000475912 SETXQ7Z333 2677 aaKnown RBP4.83□□□□□ -1.64
PRKD3-208ENST00000475912 TET1Q8NFU7 2136 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 WDFY3Q8IZQ1 3526 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 A0A1B0GUV1 79 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 PLSCR5A0PG75 271 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 IRAK2O43187 625 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 CXCL10P02778 98 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 UBTFL1P0CB47 393 aaPredicted RBP4.82□□□□□ -1.64
PRKD3-208ENST00000475912 EEF2P13639 858 aaKnown RBP4.82□□□□□ -1.64
PRKD3-208ENST00000475912 ARSFP54793 590 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 ERVFC1-1P60608 527 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 FAM27E3Q08E93 113 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 GPM6BQ13491 265 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 ADCK5Q3MIX3 580 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 TYW3Q6IPR3 259 aaKnown RBP4.82□□□□□ -1.64
PRKD3-208ENST00000475912 DENND1BQ6P3S1 775 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 SPSB3Q6PJ21 355 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 FAM133AQ8N9E0 248 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 DNAAF1Q8NEP3 725 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 SPPL3Q8TCT6 385 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 DYNLL2Q96FJ2 89 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 SLITRK1Q96PX8 696 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 C1QTNF4Q9BXJ3 329 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 IL25Q9H293 177 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 TTC12Q9H892 705 aaPredicted RBP4.82□□□□□ -1.64
PRKD3-208ENST00000475912 RAVER2Q9HCJ3 691 aaKnown RBP4.82□□□□□ -1.64
PRKD3-208ENST00000475912 TMEM51Q9NW97 253 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 RRN3Q9NYV6 651 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 MYH1P12882 1939 aa4.82□□□□□ -1.64
PRKD3-208ENST00000475912 ZZEF1O43149 2961 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 MAP1BP46821 2468 aaKnown RBP4.81□□□□□ -1.64
PRKD3-208ENST00000475912 PTPRCP08575 1304 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 A0A1B0GVM2 712 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 DYTNA2CJ06 578 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 SRRM3A6NNA2 597 aaPredicted RBP4.81□□□□□ -1.64
PRKD3-208ENST00000475912 TIMM23O14925 209 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 ATP2A1O14983 1001 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 SH3BP5O60239 455 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 CSPG5O95196 566 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 UQCRFS1P1P0C7P4 283 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 LINC00271P0C7V0 271 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 MAPK9P45984 424 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 EEF1A2Q05639 463 aaKnown RBP4.81□□□□□ -1.64
PRKD3-208ENST00000475912 LPIN1Q14693 890 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 SLC39A14Q15043 492 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 SLC18A3Q16572 532 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 CCDC184Q52MB2 194 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 ALFQ53S48 1182 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 EFHC1Q5JVL4 640 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 ANKRD45Q5TZF3 282 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 CYP26C1Q6V0L0 522 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 LRRC8DQ7L1W4 858 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 MON1AQ86VX9 555 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 WDR63Q8IWG1 891 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 KIAA2013Q8IYS2 634 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 MCPH1Q8NEM0 835 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 HSPH1Q92598 858 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 SLF1Q9BQI6 1058 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 RIOK1Q9BRS2 568 aaKnown RBP4.81□□□□□ -1.64
PRKD3-208ENST00000475912 SH2D4AQ9H788 454 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 ZNF556Q9HAH1 456 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 ENTPD7Q9NQZ7 604 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 Q9Y3F1 56 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 MCM3APO60318 1980 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 ATG2AQ2TAZ0 1938 aa4.81□□□□□ -1.64
PRKD3-208ENST00000475912 SMG1Q96Q15 3661 aaKnown RBP4.8□□□□□ -1.64
PRKD3-208ENST00000475912 FRYQ5TBA9 3013 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 EP300Q09472 2414 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-208ENST00000475912 CEP250Q9BV73 2442 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 DENND3A2RUS2 1198 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 ASB14A6NK59 587 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 ANP32CO43423 234 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 IDH1O75874 414 aaKnown RBP4.8□□□□□ -1.64
PRKD3-208ENST00000475912 ICAM3P32942 547 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 TUBA1BP68363 451 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 ADORA2A-AS1P86434 159 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 CYP4A11Q02928 519 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 CAMK1Q14012 370 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 PTGISQ16647 500 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 DUSP28Q4G0W2 176 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 RETSATQ6NUM9 610 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 MYOCDQ8IZQ8 938 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 AFAP1L1Q8TED9 768 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 SDR42E1Q8WUS8 393 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 RNF183Q96D59 192 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 RPGRIP1Q96KN7 1286 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 UBXN10Q96LJ8 280 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 ZSCAN31Q96LW9 406 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-208ENST00000475912 YME1L1Q96TA2 773 aa4.8□□□□□ -1.64
PRKD3-208ENST00000475912 MTG1Q9BT17 334 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms