RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 GAPDHSO14556 408 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 TERTO14746 1132 aaKnown RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 BUD23O43709 281 aaKnown RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 UGT1A9O60656 530 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 CST8O60676 142 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 WISP1O95388 367 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 NDST3O95803 873 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 EPOP01588 193 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 SLC4A1P02730 911 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 GPR89BP0CG08 455 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 ZFXP17010 805 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 TYRP1P17643 537 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 UGT1A6P19224 532 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 NFKB1P19838 968 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 UGT1A1P22309 533 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 UGT1A4P22310 534 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 CHRNA4P43681 627 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 MAPK9P45984 424 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 NR2C2P49116 596 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 CTSCP53634 463 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 WNT3AP56704 352 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 PPP1CAP62136 330 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 TMEM115Q12893 351 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 MSLNQ13421 630 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 PTPRCAPQ14761 206 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 SEPT7Q16181 437 aaKnown RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 SIRPB2Q5JXA9 342 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 KAZNQ674X7 775 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 XKR5Q6UX68 686 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 FAM83HQ6ZRV2 1179 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 TMEM26Q6ZUK4 368 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 ZC3H18Q86VM9 953 aaKnown RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 PHYKPLQ8IUZ5 450 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 RHOT1Q8IXI2 618 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 ZNF567Q8N184 647 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 RASGEF1AQ8N9B8 481 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 TC2NQ8N9U0 490 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 RNF214Q8ND24 703 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 SH3KBP1Q96B97 665 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 C9orf72Q96LT7 481 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 ZNF830Q96NB3 372 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 GPR63Q9BZJ6 419 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 TRIM4Q9C037 500 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 DEF6Q9H4E7 631 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 OCEL1Q9H607 264 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 UCK1Q9HA47 277 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 UGT1A7Q9HAW7 530 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 UGT1A10Q9HAW8 530 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 UGT1A8Q9HAW9 530 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 HAUS2Q9NVX0 235 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 TRIM10Q9UDY6 481 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 TMEM184BQ9Y519 407 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 MN1Q10571 1320 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 ANKRD36A6QL64 1941 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 HECTD1Q9ULT8 2610 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 hCG_1818297A0A087WSY0 165 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 RCCD1A6NED2 376 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 LILRA5A6NI73 299 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 PPP1R12AO14974 1030 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 POLR1CO15160 346 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 KMOO15229 486 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 CAPN5O15484 640 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 CBFA2T2O43439 604 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 VEGFDO43915 354 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 STK17BO94768 372 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 UBXN7O94888 489 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 CDK14O94921 469 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 LCA5LO95447 670 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 DLGAP3O95886 979 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 AGTP01019 485 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 TPM3P06753 285 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 ANKRD34CP0C6C1 535 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 MAP4P27816 1152 aaKnown RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 ATP1A2P50993 1020 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 HADHBP55084 474 aaKnown RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 POLE2P56282 527 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 RAB15P59190 212 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 KCNC4Q03721 635 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 OLIG2Q13516 323 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 TRIM14Q14142 442 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 GPR18Q14330 331 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 SLC1A5Q15758 541 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 CHRNA6Q15825 494 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 ZNF569Q5MCW4 686 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 ATP1A1-AS1Q5TC04 95 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 AGAP9Q5VTM2 703 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 PDPK2PQ6A1A2 396 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 WASH2PQ6VEQ5 465 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 SPOCD1Q6ZMY3 1216 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 MICALCLQ6ZW33 695 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 PRICKLE2Q7Z3G6 844 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 LRRTM4Q86VH4 590 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 PLXDC1Q8IUK5 500 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 RHOT2Q8IXI1 618 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 NLGN4XQ8N0W4 816 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 SLC25A41Q8N5S1 370 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 ZSCAN1Q8NBB4 408 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 NLGN4YQ8NFZ3 816 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms