RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 KAT14Q9H8E8 782 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 UPF2Q9HAU5 1272 aaKnown RBP6.09□□□□□ -1.43
SMC5-203ENST00000475540 ZNF69Q9UC07 566 aa6.09□□□□□ -1.43
SMC5-203ENST00000475540 A0A1W2PP11 408 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 MYO1GB0I1T2 1018 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 IGHV4-39P01824 125 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 LAMP2P13473 410 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 GM2AP17900 193 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 CDKN1AP38936 164 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 EIF4A2Q14240 407 aaKnown RBP6.08□□□□□ -1.44
SMC5-203ENST00000475540 GKAP1Q5VSY0 366 aaPredicted RBP6.08□□□□□ -1.44
SMC5-203ENST00000475540 ACSM2BQ68CK6 577 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 KLHL35Q6PF15 583 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 IKBIPQ70UQ0 350 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 TSPAN33Q86UF1 283 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 RASGEF1CQ8N431 466 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 SLC5A8Q8N695 610 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 SCRN2Q96FV2 425 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 ST6GAL2Q96JF0 529 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 CMTM3Q96MX0 182 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 KRT84Q9NSB2 600 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 HCFC1R1Q9NWW0 138 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 ERRFI1Q9UJM3 462 aaPredicted RBP6.08□□□□□ -1.44
SMC5-203ENST00000475540 PNMA2Q9UL42 364 aa6.08□□□□□ -1.44
SMC5-203ENST00000475540 PRSS47A8MTI9 375 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 MAP2K7O14733 419 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 CENPBP07199 599 aaPredicted RBP6.07□□□□□ -1.44
SMC5-203ENST00000475540 ACTN1P12814 892 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 ANXA7P20073 488 aaKnown RBP6.07□□□□□ -1.44
SMC5-203ENST00000475540 RUNX1T1Q06455 604 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 CRYMQ14894 314 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 TMEM154Q6P9G4 183 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 RSRC2Q7L4I2 434 aaKnown RBP6.07□□□□□ -1.44
SMC5-203ENST00000475540 TICAM1Q8IUC6 712 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 PM20D2Q8IYS1 436 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 GCSAMQ8N6F7 178 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 SLC38A9Q8NBW4 561 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 UBE2Q2Q8WVN8 375 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 MOAP1Q96BY2 351 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 ABHD8Q96I13 439 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 DUX3Q96PT4 197 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 DBNLQ9UJU6 430 aaKnown RBP6.07□□□□□ -1.44
SMC5-203ENST00000475540 LYVE1Q9Y5Y7 322 aa6.07□□□□□ -1.44
SMC5-203ENST00000475540 F5H0A9 414 aaPredicted RBP6.06□□□□□ -1.44
SMC5-203ENST00000475540 SMAD9O15198 467 aaKnown RBP6.06□□□□□ -1.44
SMC5-203ENST00000475540 SCGB1D1O95968 90 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 CSF2RAP15509 400 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 PAX1P15863 534 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 TNFAIP3P21580 790 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 TIMP3P35625 211 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 CTSCP53634 463 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 LINC01547P58512 204 aaPredicted RBP6.06□□□□□ -1.44
SMC5-203ENST00000475540 PCGF3Q3KNV8 242 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 SNX30Q5VWJ9 437 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 ZNF449Q6P9G9 518 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 SLC27A1Q6PCB7 646 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 ATG9AQ7Z3C6 839 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 MAATS1Q7Z4T9 603 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 TEX11Q8IYF3 940 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 TEX19Q8NA77 164 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 GSDMBQ8TAX9 411 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 GRAPLQ8TC17 118 aaPredicted RBP6.06□□□□□ -1.44
SMC5-203ENST00000475540 USP6NLQ92738 828 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 BCCIPQ9P287 314 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMC5-203ENST00000475540 KLHL9Q9P2J3 617 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 SESN1Q9Y6P5 492 aa6.06□□□□□ -1.44
SMC5-203ENST00000475540 WDR81Q562E7 1941 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 C15orf62A8K5M9 175 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 ERVV-2B6SEH9 535 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 OGG1O15527 345 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 ZBTB43O43298 467 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 HS6ST1O60243 411 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 USO1O60763 962 aaKnown RBP6.05□□□□□ -1.44
SMC5-203ENST00000475540 TMCC2O75069 709 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 CAVIN2O95810 425 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 MSH2P43246 934 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 RBM39Q14498 530 aaKnown RBP6.05□□□□□ -1.44
SMC5-203ENST00000475540 ASPRV1Q53RT3 343 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 JADE1Q6IE81 842 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 FOXP4Q8IVH2 680 aaPredicted RBP6.05□□□□□ -1.44
SMC5-203ENST00000475540 GBGT1Q8N5D6 347 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 ZBTB8BQ8NAP8 495 aaPredicted RBP6.05□□□□□ -1.44
SMC5-203ENST00000475540 HJURPQ8NCD3 748 aaPredicted RBP6.05□□□□□ -1.44
SMC5-203ENST00000475540 TRPC4APQ8TEL6 797 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 ELMOD3Q96FG2 381 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 STAMBPL1Q96FJ0 436 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 ITPAQ9BY32 194 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 SETD4Q9NVD3 440 aa6.05□□□□□ -1.44
SMC5-203ENST00000475540 TMEM184BQ9Y519 407 aaPredicted RBP6.05□□□□□ -1.44
SMC5-203ENST00000475540 FRMD3A2A2Y4 597 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 PI4KAP2A4QPH2 592 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 PGPEP1LA6NFU8 196 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 TMEM178BH3BS89 294 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 PLPP2O43688 288 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 CTSVO60911 334 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 ACADMP11310 421 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 ACADLP28330 430 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 GPR143P51810 404 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 CD81P60033 236 aa6.04□□□□□ -1.44
SMC5-203ENST00000475540 Q75L30 129 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms