RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 CCZ1BP86790 482 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 CCZ1P86791 482 aaPredicted RBP16.81■□□□□ 0.28
COMMD3-210ENST00000472610 MSLNQ13421 630 aaPredicted RBP16.81■□□□□ 0.28
COMMD3-210ENST00000472610 KHDC1Q4VXA5 237 aaKnown RBP16.81■□□□□ 0.28
COMMD3-210ENST00000472610 KCTD11Q693B1 232 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 DENND5AQ6IQ26 1287 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 FOXR1Q6PIV2 292 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 C19orf48Q6RUI8 117 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 CRTC3Q6UUV7 619 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 USP53Q70EK8 1073 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 SLITRK4Q8IW52 837 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 DDHD1Q8NEL9 900 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 OR4K2Q8NGD2 314 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 RTP4Q96DX8 246 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 CCDC97Q96F63 343 aaPredicted RBP16.81■□□□□ 0.28
COMMD3-210ENST00000472610 CMKLR1Q99788 373 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.81■□□□□ 0.28
COMMD3-210ENST00000472610 OSGEPL1Q9H4B0 414 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 UGT1A7Q9HAW7 530 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 UGT1A10Q9HAW8 530 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 UGT1A8Q9HAW9 530 aa16.81■□□□□ 0.28
COMMD3-210ENST00000472610 DNMT3AQ9Y6K1 912 aaPredicted RBP16.81■□□□□ 0.28
COMMD3-210ENST00000472610 CDRT15L2A8MXV6 281 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 GAPDHSO14556 408 aaPredicted RBP16.8■□□□□ 0.28
COMMD3-210ENST00000472610 LIASO43766 372 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 PRAMEF1O95521 474 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 XRCC1P18887 633 aaPredicted RBP16.8■□□□□ 0.28
COMMD3-210ENST00000472610 GDF10P55107 478 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 OLIG2Q13516 323 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 TRA2AQ13595 282 aaKnown RBP eCLIP16.8■□□□□ 0.28
COMMD3-210ENST00000472610 SPARCL1Q14515 664 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 COL28A1Q2UY09 1125 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 PHF19Q5T6S3 580 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 LINC00523Q86TU6 105 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 TRAPPC5Q8IUR0 188 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 ZNF547Q8IVP9 402 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 OR10G6Q8NH81 332 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 MAIP1Q8WWC4 291 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 AHCYL2Q96HN2 611 aaKnown RBP16.8■□□□□ 0.28
COMMD3-210ENST00000472610 ZNF514Q96K75 400 aaPredicted RBP16.8■□□□□ 0.28
COMMD3-210ENST00000472610 ASB8Q9H765 288 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 RDH14Q9HBH5 336 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 PRDM8Q9NQV8 689 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 SLC23A2Q9UGH3 650 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 ZNF148Q9UQR1 794 aa16.8■□□□□ 0.28
COMMD3-210ENST00000472610 WDFY3Q8IZQ1 3526 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 ERI2A8K979 691 aaKnown RBP16.79■□□□□ 0.28
COMMD3-210ENST00000472610 SRP72O76094 671 aaKnown RBP16.79■□□□□ 0.28
COMMD3-210ENST00000472610 AP2A1O95782 977 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 JMJD7P0C870 316 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 MSH3P20585 1137 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 IDSP22304 550 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 LIMK2P53671 638 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 EPHA4P54764 986 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 PTPRCAPQ14761 206 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 OASLQ15646 514 aaKnown RBP16.79■□□□□ 0.28
COMMD3-210ENST00000472610 GPRC6AQ5T6X5 926 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 ABRAXAS1Q6UWZ7 409 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 WASH2PQ6VEQ5 465 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 TMPRSS9Q7Z410 1059 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 CLEC14AQ86T13 490 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 OR4D9Q8NGE8 314 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 ATG4AQ8WYN0 398 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 DPH1Q9BZG8 443 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 SEMA6CQ9H3T2 930 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 EPB41L1Q9H4G0 881 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 GRPEL1Q9HAV7 217 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 WASH6PQ9NQA3 447 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 CPNE7Q9UBL6 633 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 FKBPLQ9UIM3 349 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 DNAJC16Q9Y2G8 782 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 PPP2R2CQ9Y2T4 447 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 LOXL2Q9Y4K0 774 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 PKD1L2Q7Z442 2459 aa16.79■□□□□ 0.28
COMMD3-210ENST00000472610 ZZEF1O43149 2961 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 KLHL33A6NCF5 533 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 PRR19A6NJB7 356 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 AGAP14A8MT82 685 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 HGSO14964 777 aaPredicted RBP16.78■□□□□ 0.28
COMMD3-210ENST00000472610 DUX1O43812 170 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 FDFT1P37268 417 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 PPM1FP49593 454 aaPredicted RBP16.78■□□□□ 0.28
COMMD3-210ENST00000472610 CCDC173Q0VFZ6 552 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 NFATC2Q13469 925 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 LONRF2Q1L5Z9 754 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 PLA2G4EQ3MJ16 856 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 AGAP9Q5VTM2 703 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 TMEM71Q6P5X7 295 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 ZNF574Q6ZN55 896 aaPredicted RBP16.78■□□□□ 0.28
COMMD3-210ENST00000472610 C11orf96Q7Z7L8 435 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 AMZ2Q86W34 360 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 RASGEF1AQ8N9B8 481 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 HEXDCQ8WVB3 486 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 KCNE4Q8WWG9 221 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 ULK4Q96C45 1275 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 NUDT22Q9BRQ3 303 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 UCK1Q9HA47 277 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 ZKSCAN5Q9Y2L8 839 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 KCTD3Q9Y597 815 aa16.78■□□□□ 0.28
COMMD3-210ENST00000472610 PCDHGA7Q9Y5G6 932 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms