RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 FOXP3Q9BZS1 431 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 ZCCHC2Q9C0B9 1178 aaKnown RBP9.02□□□□□ -0.97
SYN3-211ENST00000472027 OSGEPL1Q9H4B0 414 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 FAM96AQ9H5X1 160 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 POLR1BQ9H9Y6 1135 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 NLE1Q9NVX2 485 aaPredicted RBP9.02□□□□□ -0.97
SYN3-211ENST00000472027 SMOXQ9NWM0 555 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 CRLS1Q9UJA2 301 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 SATB2Q9UPW6 733 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 DNAJC16Q9Y2G8 782 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 DNMT3AQ9Y6K1 912 aaPredicted RBP9.02□□□□□ -0.97
SYN3-211ENST00000472027 SLC30A1Q9Y6M5 507 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 NCOR2Q9Y618 2525 aa9.02□□□□□ -0.97
SYN3-211ENST00000472027 KIR2DS5A0A0G2JLQ3 304 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 A0A0G2JNG1 304 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 A0A1W2PNU3 283 aaPredicted RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 MROH6A6NGR9 719 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 PRR19A6NJB7 356 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 OR2AG2A6NM03 316 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 D6RAR5 112 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 TMX2-CTNND1H3BSU7 103 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 H7C0S8 307 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 KIR2DS3K7RE56 304 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 KIF5CO60282 957 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 BRINP1O60477 761 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 KCNJ13O60928 360 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 GAS8O95995 478 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 APRTP07741 180 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 SLC2A4P14672 509 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 XRCC1P18887 633 aaPredicted RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 MSH3P20585 1137 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 IDSP22304 550 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 MSNP26038 577 aaKnown RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 CD1CP29017 333 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 AKT1P31749 480 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 MC4RP32245 332 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 CDKN1CP49918 316 aaPredicted RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 INHBCP55103 352 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 GABREP78334 506 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 HHEXQ03014 270 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 ZFP36L1Q07352 338 aaKnown RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 SEPT6Q14141 434 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 KIR2DS5Q14953 304 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 KCTD19Q17RG1 926 aaPredicted RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 C3orf38Q5JPI3 329 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 NKAIN2Q5VXU1 208 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 ABRAXAS1Q6UWZ7 409 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 PPP1R21Q6ZMI0 780 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 ZNF574Q6ZN55 896 aaPredicted RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 MICALCLQ6ZW33 695 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 DET1Q7L5Y6 550 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 TMPRSS9Q7Z410 1059 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 SNX20Q7Z614 316 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 PIM3Q86V86 326 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 AMZ2Q86W34 360 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 ZNF761Q86XN6 746 aaPredicted RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 LSMEM2Q8N112 164 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 MAGOHBQ96A72 148 aaKnown RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 SH3KBP1Q96B97 665 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 ULK4Q96C45 1275 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 SGF29Q96ES7 293 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 PRR11Q96HE9 360 aaPredicted RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 OSBPL9Q96SU4 736 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 AP1M1Q9BXS5 423 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 STN1Q9H668 368 aaKnown RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 RDH14Q9HBH5 336 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 SARS2Q9NP81 518 aaKnown RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 CASS4Q9NQ75 786 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 KCNK4Q9NYG8 393 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 SCHIP1Q9P0W5 487 aaPredicted RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 TTC7AQ9ULT0 858 aaPredicted RBP9.01□□□□□ -0.97
SYN3-211ENST00000472027 RAXQ9Y2V3 346 aa9.01□□□□□ -0.97
SYN3-211ENST00000472027 IGHV1OR21-1A0A087WYE8 117 aa9□□□□□ -0.97
SYN3-211ENST00000472027 CCDC187A0A096LP49 1063 aa9□□□□□ -0.97
SYN3-211ENST00000472027 CCDC78A2IDD5 438 aa9□□□□□ -0.97
SYN3-211ENST00000472027 USP27XA6NNY8 438 aa9□□□□□ -0.97
SYN3-211ENST00000472027 PDZK1P1A8MUH7 402 aa9□□□□□ -0.97
SYN3-211ENST00000472027 TLX3O43711 291 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 SGTAO43765 313 aa9□□□□□ -0.97
SYN3-211ENST00000472027 DXOO77932 396 aaKnown RBP9□□□□□ -0.97
SYN3-211ENST00000472027 CPNE6O95741 557 aa9□□□□□ -0.97
SYN3-211ENST00000472027 PRSS56P0CW18 603 aa9□□□□□ -0.97
SYN3-211ENST00000472027 ATP1B2P14415 290 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 HOXB3P14651 431 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 BRAFP15056 766 aa9□□□□□ -0.97
SYN3-211ENST00000472027 VCLP18206 1134 aa9□□□□□ -0.97
SYN3-211ENST00000472027 ITGALP20701 1170 aa9□□□□□ -0.97
SYN3-211ENST00000472027 ADRA1DP25100 572 aa9□□□□□ -0.97
SYN3-211ENST00000472027 PSMA3P25788 255 aa9□□□□□ -0.97
SYN3-211ENST00000472027 RPL10P27635 214 aaKnown RBP9□□□□□ -0.97
SYN3-211ENST00000472027 CCKBRP32239 447 aa9□□□□□ -0.97
SYN3-211ENST00000472027 SLC19A1P41440 591 aa9□□□□□ -0.97
SYN3-211ENST00000472027 ARSDP51689 593 aa9□□□□□ -0.97
SYN3-211ENST00000472027 DRG2P55039 364 aaKnown RBP9□□□□□ -0.97
SYN3-211ENST00000472027 GPLD1P80108 840 aa9□□□□□ -0.97
SYN3-211ENST00000472027 BASP1P80723 227 aaKnown RBP9□□□□□ -0.97
SYN3-211ENST00000472027 CFHR1Q03591 330 aa9□□□□□ -0.97
SYN3-211ENST00000472027 DMPKQ09013 629 aa9□□□□□ -0.97
SYN3-211ENST00000472027 SQSTM1Q13501 440 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms