RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CCDC50Q8IVM0 306 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 ZNF547Q8IVP9 402 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 KATNAL2Q8IYT4 538 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 RCOR2Q8IZ40 523 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 CACNA2D3Q8IZS8 1091 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 SLC25A41Q8N5S1 370 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 HAUS1Q96CS2 278 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 TEFMQ96QE5 360 aaKnown RBP22.21■■□□□ 1.15
C9orf3-213ENST00000471978 VPS35Q96QK1 796 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 CTRCQ99895 268 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 TIMM29Q9BSF4 260 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 TRIM5Q9C035 493 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 TRABDQ9H4I3 376 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 TMPRSS11EQ9UL52 423 aa22.21■■□□□ 1.15
C9orf3-213ENST00000471978 FLNBO75369 2602 aaKnown RBP22.2■■□□□ 1.14
C9orf3-213ENST00000471978 hCG_1818297A0A087WSY0 165 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 PDZK1P1A8MUH7 402 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 F5H423 210 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-213ENST00000471978 RAD1O60671 282 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 VIPP01282 170 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 EPOP01588 193 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 MARCKSL1P49006 195 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 ATP13A5Q4VNC0 1218 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 PID1Q7Z2X4 250 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 PLXDC1Q8IUK5 500 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 TRIM48Q8IWZ4 208 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 ZNF567Q8N184 647 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 GDAP1Q8TB36 358 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 HTR3CQ8WXA8 447 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 RTP4Q96DX8 246 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 MRGPRX2Q96LB1 330 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 FCRL5Q96RD9 977 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 VAT1Q99536 393 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 UCK1Q9HA47 277 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 TFR2Q9UP52 801 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.2■■□□□ 1.14
C9orf3-213ENST00000471978 PCDHA13Q9Y5I0 950 aa22.2■■□□□ 1.14
C9orf3-213ENST00000471978 ASH1LQ9NR48 2969 aaKnown RBP22.19■■□□□ 1.14
C9orf3-213ENST00000471978 LCA5LO95447 670 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 FAM87AP0C7U9 286 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 LIFP15018 202 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 SLC19A1P41440 591 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 CHRNA4P43681 627 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 TMEM115Q12893 351 aaPredicted RBP22.19■■□□□ 1.14
C9orf3-213ENST00000471978 NFATC3Q12968 1075 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 SARM1Q6SZW1 724 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 CEACAM20Q6UY09 585 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 TMEM26Q6ZUK4 368 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 TTC30BQ8N4P2 665 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 OXNAD1Q96HP4 312 aaPredicted RBP22.19■■□□□ 1.14
C9orf3-213ENST00000471978 QKIQ96PU8 341 aaKnown RBP eCLIP22.19■■□□□ 1.141e-6■■■■□ 19.6
C9orf3-213ENST00000471978 IL26Q9NPH9 171 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 FBXO8Q9NRD0 319 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 ZNF624Q9P2J8 865 aaPredicted RBP22.19■■□□□ 1.14
C9orf3-213ENST00000471978 PILRAQ9UKJ1 303 aa22.19■■□□□ 1.14
C9orf3-213ENST00000471978 TLN1Q9Y490 2541 aaKnown RBP22.19■■□□□ 1.14
C9orf3-213ENST00000471978 MN1Q10571 1320 aaPredicted RBP22.18■■□□□ 1.14
C9orf3-213ENST00000471978 PRR19A6NJB7 356 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 HACD1B0YJ81 288 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 UBXN7O94888 489 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 RPL10P27635 214 aaKnown RBP22.18■■□□□ 1.14
C9orf3-213ENST00000471978 GTF2H3Q13889 308 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 SPA17Q15506 151 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 SLC1A5Q15758 541 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 ZDHHC20Q5W0Z9 365 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 C11orf63Q6NUN7 778 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 ABRAXAS1Q6UWZ7 409 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 TRAPPC5Q8IUR0 188 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 CCDC170Q8IYT3 715 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 IPMKQ8NFU5 416 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 RBM41Q96IZ5 413 aaKnown RBP22.18■■□□□ 1.14
C9orf3-213ENST00000471978 TTC25Q96NG3 672 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 ZPBPQ9BS86 351 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 SLC12A9Q9BXP2 914 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 OGFRQ9NZT2 677 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 HACD3Q9P035 362 aa22.18■■□□□ 1.14
C9orf3-213ENST00000471978 TYRP1P17643 537 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 VCLP18206 1134 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 IDSP22304 550 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 SPAM1P38567 509 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 GFERP55789 205 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 MPP3Q13368 585 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 GLT6D1Q7Z4J2 308 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 C11orf96Q7Z7L8 435 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 BRSK1Q8TDC3 778 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 BLOC1S5Q8TDH9 187 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 KRT35Q92764 455 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 HEMGNQ9BXL5 484 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 SPRY4Q9C004 299 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 APMAPQ9HDC9 416 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 LUC7LQ9NQ29 371 aaKnown RBP22.17■■□□□ 1.14
C9orf3-213ENST00000471978 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.17■■□□□ 1.14
C9orf3-213ENST00000471978 IL17CQ9P0M4 197 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 TRIM10Q9UDY6 481 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 RSPH14Q9UHP6 348 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 TRHDEQ9UKU6 1024 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 SLC30A1Q9Y6M5 507 aa22.17■■□□□ 1.14
C9orf3-213ENST00000471978 OR52A4PA6NMU1 304 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 SLC28A2O43868 658 aa22.16■■□□□ 1.14
C9orf3-213ENST00000471978 C9P02748 559 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms