RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ISG20Q96AZ6 181 aaKnown RBP6.41□□□□□ -1.38
HDAC3-206ENST00000471968 CALML4Q96GE6 196 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 HERPUD2Q9BSE4 406 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 SARGQ9BW04 601 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 ATP13A1Q9HD20 1204 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 GOLGA6AQ9NYA3 693 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 TSPAN16Q9UKR8 245 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 TMEM98Q9Y2Y6 226 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 ASB1Q9Y576 335 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 PCM1Q15154 2024 aa6.41□□□□□ -1.38
HDAC3-206ENST00000471968 SYNJ2BP-COX16A0A087WUM0 186 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 A0A1W2PPR1 153 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 LRRIQ3A6PVS8 624 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-206ENST00000471968 CES2O00748 559 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 PIGNO95427 931 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 ELFN1P0C7U0 828 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 F3P13726 295 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 SLC2A4P14672 509 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 GM2AP17900 193 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 CYP2A7P20853 494 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 PSMA5P28066 241 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 PRPHP41219 470 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 UBE2IP63279 158 aaKnown RBP6.4□□□□□ -1.38
HDAC3-206ENST00000471968 HSD11B2P80365 405 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 RAD51Q06609 339 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 TNK1Q13470 666 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 ALCAMQ13740 583 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 LRP8Q14114 963 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 SLC9A5Q14940 896 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 ACOX1Q15067 660 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 AGAP9Q5VTM2 703 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 SYPL2Q5VXT5 272 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 LEKR1Q6ZMV7 388 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 RUFY3Q7L099 469 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 SETD3Q86TU7 594 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-206ENST00000471968 ZNF354CQ86Y25 554 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 GALNT13Q8IUC8 556 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 D2HGDHQ8N465 521 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 SLC4A11Q8NBS3 891 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 KCNB2Q92953 911 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 FAM149B1Q96BN6 582 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 PLEKHG4BQ96PX9 1271 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 C17orf62Q9BQA9 187 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 DPH2Q9BQC3 489 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-206ENST00000471968 TRIM51Q9BSJ1 452 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 MIS12Q9H081 205 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 UCK1Q9HA47 277 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 CYP3A43Q9HB55 503 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 GPATCH2LQ9NWQ4 482 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 COX16Q9P0S2 106 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 SEMA5BQ9P283 1151 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 HESX1Q9UBX0 185 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 NDOR1Q9UHB4 597 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 CDC23Q9UJX2 597 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 NOL7Q9UMY1 257 aaKnown RBP6.4□□□□□ -1.38
HDAC3-206ENST00000471968 KCNK6Q9Y257 313 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 ATP8A1Q9Y2Q0 1164 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 MRPS2Q9Y399 296 aaKnown RBP6.4□□□□□ -1.38
HDAC3-206ENST00000471968 PRKAB1Q9Y478 270 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 HRH3Q9Y5N1 445 aa6.4□□□□□ -1.38
HDAC3-206ENST00000471968 FIGNL2A6NMB9 653 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 CLCA1A8K7I4 914 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 A8MX80 341 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 CNOT3O75175 753 aaKnown RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 WDPCPO95876 746 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 TRUB2O95900 331 aaKnown RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 VIPP01282 170 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 STATHP02808 62 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 RPN1P04843 607 aaKnown RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 UQCRHP07919 91 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 GAP43P17677 238 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 IL4RP24394 825 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 TACR1P25103 407 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 OR1E1P30953 314 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 SOX5P35711 763 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 PEX19P40855 299 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 PIK3CAP42336 1068 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 ARSEP51690 589 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 AP3M2P53677 418 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 NUP107P57740 925 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 PITX1P78337 314 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 RALGDSQ12967 914 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 OTUD1Q5VV17 481 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 ATG9BQ674R7 924 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 LIPIQ6XZB0 460 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 CHST15Q7LFX5 561 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 KMT5CQ86Y97 462 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 MCATQ8IVS2 390 aaKnown RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 TRIM48Q8IWZ4 208 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 LRRC17Q8N6Y2 441 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 AVL9Q8NBF6 648 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 OR10Q1Q8NGQ4 319 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 RASSF8Q8NHQ8 419 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 ARHGEF2Q92974 986 aaKnown RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 NUS1Q96E22 293 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 SIGLEC12Q96PQ1 595 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 SIK2Q9H0K1 926 aa6.39□□□□□ -1.39
HDAC3-206ENST00000471968 NOL6Q9H6R4 1146 aaKnown RBP6.39□□□□□ -1.39
HDAC3-206ENST00000471968 RMI1Q9H9A7 625 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms