RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 NPEPPSL1A6NEC2 478 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 SYCE1LA8MT33 242 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 K7ERQ8 282 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 PSMD12O00232 456 aaPredicted RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 TRIM38O00635 465 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 SCAMP3O14828 347 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 PIP5K1BO14986 540 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 STX7O15400 261 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 GPR39O43194 453 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 SMAD6O43541 496 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 TGM5O43548 720 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 PEX1O43933 1283 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 SOCS5O75159 536 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 VPS26AO75436 327 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 BCAS2O75934 225 aaPredicted RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 BAG2O95816 211 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 FGBP02675 491 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 ESR1P03372 595 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 PYGLP06737 847 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 ALPIP09923 528 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 CTSAP10619 480 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 ENO3P13929 434 aaPredicted RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 HDCP19113 662 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 ME2P23368 584 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 RPS3P23396 243 aaKnown RBP eCLIP6.35□□□□□ -1.39
SPEN-204ENST00000471538 GABRR2P28476 465 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 EEF1DP29692 281 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 RPL26P61254 145 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 PSME3P61289 254 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 NAA20P61599 178 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 IRX1P78414 480 aaPredicted RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 MRPS35P82673 323 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 CYP4F8P98187 520 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 CREMQ03060 361 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 TFF2Q03403 129 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 CLCQ05315 142 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 CACNG1Q06432 222 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 KLC1Q07866 573 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 LMAN2Q12907 356 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 LCP2Q13094 533 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 STX5Q13190 355 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 FASTKQ14296 549 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 ZRSR2Q15696 482 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 GSTA3Q16772 222 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 SFT2D3Q587I9 215 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 XKR7Q5GH72 579 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 AARS2Q5JTZ9 985 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 MPP7Q5T2T1 576 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 ARMC12Q5T9G4 340 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 OGFRL1Q5TC84 451 aaPredicted RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 TRIM68Q6AZZ1 485 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 OGFOD2Q6N063 350 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 TXNDC11Q6PKC3 985 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 BRICD5Q6PL45 260 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 IZUMO2Q6UXV1 221 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 LYSMD3Q7Z3D4 306 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 RAB44Q7Z6P3 723 aaPredicted RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 RYBPQ8N488 228 aaPredicted RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 FBXO39Q8N4B4 442 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 EFHBQ8N7U6 833 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 SIDT2Q8NBJ9 832 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 OR9I1Q8NGQ6 314 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 UCMAQ8WVF2 138 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 TWIST2Q8WVJ9 160 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 GATA6Q92908 595 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 USP13Q92995 863 aaPredicted RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 EXT2Q93063 718 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 ACDQ96AP0 544 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 CCDC97Q96F63 343 aaPredicted RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 PDLIM5Q96HC4 596 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 PLEKHG4BQ96PX9 1271 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 KCNA7Q96RP8 456 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 CCDC68Q9H2F9 335 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 AKTIPQ9H8T0 292 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 FBRSL1Q9HCM7 1045 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 BPIFA1Q9NP55 256 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 MID1IP1Q9NPA3 183 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 C11orf16Q9NQ32 467 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 SLC52A3Q9NQ40 469 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 TMEM181Q9P2C4 612 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 SUCOQ9UBS9 1254 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 CD300AQ9UGN4 299 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 POLG2Q9UHN1 485 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 TRMT6Q9UJA5 497 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 RIMS3Q9UJD0 308 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 PCTPQ9UKL6 214 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 INTS6Q9UL03 887 aaKnown RBP6.35□□□□□ -1.39
SPEN-204ENST00000471538 RNF112Q9ULX5 631 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 CLEC4EQ9ULY5 219 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 TMCO1Q9UM00 188 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 PSMD13Q9UNM6 376 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 PCDHB9Q9Y5E1 797 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 PTGDR2Q9Y5Y4 395 aa6.35□□□□□ -1.39
SPEN-204ENST00000471538 A0A0J9YYE9 177 aa6.34□□□□□ -1.39
SPEN-204ENST00000471538 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.34□□□□□ -1.39
SPEN-204ENST00000471538 ATP6AP2A0A1C7CYW4 349 aa6.34□□□□□ -1.39
SPEN-204ENST00000471538 TYW5A2RUC4 315 aaKnown RBP6.34□□□□□ -1.39
SPEN-204ENST00000471538 CAPN8A6NHC0 703 aa6.34□□□□□ -1.39
SPEN-204ENST00000471538 AGAP14A8MT82 685 aa6.34□□□□□ -1.39
SPEN-204ENST00000471538 BBIP1A8MTZ0 92 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms