RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 EIF3CQ99613 913 aaKnown RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 SMAD5Q99717 465 aaKnown RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 SNRNP25Q9BV90 132 aaKnown RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 NUP85Q9BW27 656 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 CINPQ9BW66 212 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 LGR4Q9BXB1 951 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 TRIM5Q9C035 493 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 TTYH3Q9C0H2 523 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 ILKAPQ9H0C8 392 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 RAB6CQ9H0N0 254 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 RETREG1Q9H6L5 497 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 SUDS3Q9H7L9 328 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.8□□□□□ -1.48
VARS-222ENST00000470953 GPATCH2LQ9NWQ4 482 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 TAAR2Q9P1P5 351 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 CTTNBP2NLQ9P2B4 639 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 UBA2Q9UBT2 640 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 KLHL3Q9UH77 587 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 TRPS1Q9UHF7 1281 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 IP6K2Q9UHH9 426 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 FZD10Q9ULW2 581 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 CAPN11Q9UMQ6 739 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 PCDHGA10Q9Y5H3 936 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 WNK1Q9H4A3 2382 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 TRBV23OR9-2A0A075B6M9 112 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 RASA4BC9J798 803 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 FAM72CH0Y354 149 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 MYO1FO00160 1098 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 MASP2O00187 686 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 CCL21O00585 134 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 RASA4O43374 803 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 ZMPSTE24O75844 475 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 TMCC1O94876 653 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 IPO7O95373 1038 aaKnown RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 CD160O95971 181 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 GSRP00390 522 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 PCCBP05166 539 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 UGT2B4P06133 528 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 HTR1BP28222 390 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 MIPP30301 263 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 HOXC12P31275 282 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 SERPINB6P35237 376 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 GPR3P46089 330 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 ZNF135P52742 658 aaPredicted RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 YBEYP58557 167 aaPredicted RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 ARF5P84085 180 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 OGDHQ02218 1023 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 PIGHQ14442 188 aaPredicted RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 HADHQ16836 314 aaKnown RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 ZNF805Q5CZA5 627 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 CARD16Q5EG05 197 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 PPP1R15BQ5SWA1 713 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 ATXN7L2Q5T6C5 722 aaPredicted RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 ERMARDQ5T6L9 678 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 FAM72AQ5TYM5 149 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 FAM72DQ6L9T8 149 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 ALKBH5Q6P6C2 394 aaKnown RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 XKRXQ6PP77 449 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 TMCO3Q6UWJ1 677 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 RFX8Q6ZV50 586 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 BNIPLQ7Z465 357 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 ZSCAN30Q86W11 494 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 NLRP14Q86W24 1093 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 FAM72BQ86X60 149 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 DNAAF5Q86Y56 855 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 CNGA4Q8IV77 575 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 BBS5Q8N3I7 341 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 ATPAF2Q8N5M1 289 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 GRHL3Q8TE85 626 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 FNIP1Q8TF40 1166 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 CASKIN2Q8WXE0 1202 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 THAP4Q8WY91 577 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 CENPIQ92674 756 aaPredicted RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 ARHGEF2Q92974 986 aaKnown RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 ARHGEF26Q96DR7 871 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 STAMBPL1Q96FJ0 436 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 HMCESQ96FZ2 354 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 CELF6Q96J87 481 aaKnown RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 EXOC2Q96KP1 924 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 CCDC42Q96M95 316 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 ZNF830Q96NB3 372 aaPredicted RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 KLHL32Q96NJ5 620 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 MENTQ9BUN1 341 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 C1QTNF7Q9BXJ2 289 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 OSBPL1AQ9BXW6 950 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 THAP2Q9H0W7 228 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 ZBTB20Q9HC78 741 aaPredicted RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 LUC7LQ9NQ29 371 aaKnown RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 HAUS2Q9NVX0 235 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 HECAQ9UBI9 543 aaPredicted RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 LCMT1Q9UIC8 334 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 PLEKHM1Q9Y4G2 1056 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 CSAG2Q9Y5P2 127 aa5.79□□□□□ -1.48
VARS-222ENST00000470953 NCOA6Q14686 2063 aaPredicted RBP5.79□□□□□ -1.48
VARS-222ENST00000470953 A0A087X0T9 212 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 TRGV8A0A0C4DH27 118 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 TCRBV5S1A1TA0A578 114 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 TMEM191CA6NGB0 347 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 GOLGA6L6A8MZA4 724 aa5.78□□□□□ -1.48
VARS-222ENST00000470953 SMAD7O15105 426 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms