RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 SP5Q6BEB4 398 aaPredicted RBP8.82□□□□□ -1
SYNGAP1-205ENST00000470232 RAET1GQ6H3X3 334 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 ZNF571Q7Z3V5 609 aaPredicted RBP8.82□□□□□ -1
SYNGAP1-205ENST00000470232 SYVN1Q86TM6 617 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 ZNF761Q86XN6 746 aaPredicted RBP8.82□□□□□ -1
SYNGAP1-205ENST00000470232 XYLT1Q86Y38 959 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 GALNT13Q8IUC8 556 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 IQCKQ8N0W5 287 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 RTL3Q8N8U3 475 aaKnown RBP8.82□□□□□ -1
SYNGAP1-205ENST00000470232 NETO2Q8NC67 525 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 TSEN2Q8NCE0 465 aaKnown RBP8.82□□□□□ -1
SYNGAP1-205ENST00000470232 SLC37A2Q8TED4 501 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 IFT81Q8WYA0 676 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 SHC3Q92529 594 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 SCARF2Q96GP6 870 aaPredicted RBP8.82□□□□□ -1
SYNGAP1-205ENST00000470232 COQ10AQ96MF6 247 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 OR6C1Q96RD1 312 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 KRT12Q99456 494 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 LHX9Q9NQ69 397 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 APEX2Q9UBZ4 518 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 CNOT8Q9UFF9 292 aaKnown RBP8.82□□□□□ -1
SYNGAP1-205ENST00000470232 LNPEPQ9UIQ6 1025 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 SLC17A4Q9Y2C5 497 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 AKAP9Q99996 3911 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 ADGRG4Q8IZF6 3080 aa8.82□□□□□ -1
SYNGAP1-205ENST00000470232 ARGFXA6NJG6 315 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 A8MX80 341 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 CEP104O60308 925 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 SPAG6O75602 509 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 PYGLP06737 847 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 H2AFZP0C0S5 128 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 CYP2A6P11509 494 aaPredicted RBP8.81□□□□□ -1
SYNGAP1-205ENST00000470232 UCHL3P15374 230 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 PON1P27169 355 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 PTPN4P29074 926 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 EPHB2P29323 1055 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 SDC4P31431 198 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 PRKCIP41743 596 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 GPR1P46091 355 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 POLD2P49005 469 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 GNGT1P63211 74 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 NSUN2Q08J23 767 aaKnown RBP eCLIP8.81□□□□□ -1
SYNGAP1-205ENST00000470232 CDO1Q16878 200 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.81□□□□□ -1
SYNGAP1-205ENST00000470232 DENND2CQ68D51 928 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 DPY19L2P1Q6NXN4 242 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 DOK6Q6PKX4 331 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 H2AFVQ71UI9 128 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 IRF2BP2Q7Z5L9 587 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 PHLDB2Q86SQ0 1253 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 PPP1R3BQ86XI6 285 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 ZSWIM9Q86XI8 627 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 KLHL7Q8IXQ5 586 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 ECHDC3Q96DC8 303 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 C9orf72Q96LT7 481 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 HERPUD2Q9BSE4 406 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 CAPS2Q9BXY5 557 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 ACTL8Q9H568 366 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 PDE7BQ9NP56 450 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 SIX2Q9NPC8 291 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 SIDT1Q9NXL6 827 aaKnown RBP8.81□□□□□ -1
SYNGAP1-205ENST00000470232 RSPH14Q9UHP6 348 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 TMEM59LQ9UK28 342 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 PACSIN2Q9UNF0 486 aaPredicted RBP8.81□□□□□ -1
SYNGAP1-205ENST00000470232 CELSR1Q9NYQ6 3014 aa8.81□□□□□ -1
SYNGAP1-205ENST00000470232 ZNF106Q9H2Y7 1883 aaKnown RBP8.81□□□□□ -1
SYNGAP1-205ENST00000470232 KIR2DS5A0A0G2JLQ3 304 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 A0A0G2JNG1 304 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 ARHGAP42A6NI28 874 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 WASH4PA8MWX3 477 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 FAM72CH0Y354 149 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 KIR2DS3K7RE56 304 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 MYO1CO00159 1063 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 PSMD11O00231 422 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 RAD51CO43502 376 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 KLHL41O60662 606 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 SHOX2O60902 331 aaPredicted RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 GFPT2O94808 682 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 FGF5P12034 268 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 ZNF28P17035 718 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 AMD1P17707 334 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 GM2AP17900 193 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 VIPR1P32241 457 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 CDH5P33151 784 aaPredicted RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 CARSP49589 748 aaKnown RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 RENBPP51606 427 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 MMRN1Q13201 1228 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 KIR2DS5Q14953 304 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 PYCR3Q53H96 274 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 PRR30Q53SZ7 412 aaPredicted RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 FAM72AQ5TYM5 149 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 SLC6A19Q695T7 634 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 FAM72DQ6L9T8 149 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 ALKBH5Q6P6C2 394 aaKnown RBP8.8□□□□□ -1
SYNGAP1-205ENST00000470232 GJB7Q6PEY0 223 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 IYDQ6PHW0 289 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 STRADAQ7RTN6 431 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 SLFN11Q7Z7L1 901 aa8.8□□□□□ -1
SYNGAP1-205ENST00000470232 BPHLQ86WA6 291 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms